PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011070377.1
Organism
Sesamum indicum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family WRKY
Protein Properties Length: 255aa    MW: 28191.8 Da    PI: 8.7498
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011070377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.31.8e-2485144159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy WrKYGqK+ ++++ pr+YY+C+++ + p + kv+rs +dp++v+ tYeg+H+h+
  XP_011070377.1  85 VKDGYGWRKYGQKVTRDNPSPRAYYKCSFTpSLPCQEKVQRSLNDPSLVVATYEGHHHHH 144
                     58***************************9999999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-2380146IPR003657WRKY domain
PROSITE profilePS5081123.60680146IPR003657WRKY domain
SuperFamilySSF1182902.22E-2181146IPR003657WRKY domain
SMARTSM007741.2E-2185145IPR003657WRKY domain
PfamPF031063.7E-1886144IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MVEELNRMKS ENKKLSDVLT IVTRNYNDLM QTRKRKAVDP GYYNHSCRYY SCCDETSAGT  60
LPKMIKSNVS RVYVRIDPSD TSLVVKDGYG WRKYGQKVTR DNPSPRAYYK CSFTPSLPCQ  120
EKVQRSLNDP SLVVATYEGH HHHHHPSQAN VSAVSPPGGA TGTSTTAARI TGERRGSTES  180
LDFLDPLICS KIQKAIAATE SSEMQQFLVE KMASSLTRNP AFMAALATAI TGGILDEVIS  240
EENKDVVSNS RGFSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-17841471678Probable WRKY transcription factor 4
2lex_A5e-17841471678Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_011070377.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ0491266e-41KJ049126.1 Sesamum indicum clone TilSSR_20327 microsatellite Sesame_20327 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070377.20.0probable WRKY transcription factor 40
TrEMBLA0A022QPJ62e-88A0A022QPJ6_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.E01464.1.p3e-89(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-55WRKY DNA-binding protein 40