PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943685.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family EIL
Protein Properties Length: 636aa    MW: 70777.7 Da    PI: 4.8861
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943685.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3522.32e-159724501354
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel++rmw+d+m+lkrlke+++++   ke+ ++++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WW
  XP_010943685.1  72 EELERRMWRDRMRLKRLKEQQQNKN--KEQGADSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRGWW 164
                     8*********************965..77779*************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fdrngpaai+kyqa+n i++ +++l+  +++++hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtGke+ww+elg++kdq
  XP_010943685.1 165 KEKVRFDRNGPAAIAKYQAENSIPGANNELNP-GTASPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGKEEWWPELGIPKDQ 258
                     ******************************88.************************************************************** PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX....XXXXXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss....slrkqspkvtlsce 279
                     g+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+akes+++l+v++qee+++ +++++  ++    s  +++ +++ s++
  XP_010943685.1 259 GPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKESATWLAVVKQEEELYIKLHPDarPPpssgSGVTGAISFNSSSS 353
                     *************************************************************************6522544444446666666555 PP

                     XXXXXXXXXXXX.XXXXXXXXXX..........................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXX CS
            EIN3 280 qkedvegkkeskikhvqavktta..........................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadkns 348
                      ++dveg ++ k ++v ++k +                           ++++++kr    +e++++ +++v  tc++ q+ +++++++f+d+ns
  XP_010943685.1 354 -EYDVEGVDDGKGEEVGNQKVAVdgnafnlitaagnenfvvsgplkeetDVEFIQKRA--AVEPEMMPNQRV-FTCDNMQCMHNDVRFGFTDRNS 444
                     .99***99999989999999877999*********************99999999997..899999999976.********************** PP

                     XXXXXX CS
            EIN3 349 isqney 354
                     ++ ++y
  XP_010943685.1 445 RNTHQY 450
                     ****97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.7E-13372322No hitNo description
Gene3DG3DSA:1.10.3180.104.7E-75197331IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.19E-62201325IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001666Biological Processresponse to hypoxia
GO:0009873Biological Processethylene-activated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    Send to blast
MMGGLLMDSM IFSGSQNNYV PSVNEKNISF GALLNQPVVG DAILGEGDLV DPPSENFAEA  60
GEEESDDDID IEELERRMWR DRMRLKRLKE QQQNKNKEQG ADSAKQRQSQ EQARRKKMSR  120
AQDGILKYML KMMEVCKAQG FVYGIIPEKG KPVSGASDNL RGWWKEKVRF DRNGPAAIAK  180
YQAENSIPGA NNELNPGTAS PHSLQELQDT TLGSLLSALM QHCDPPQRRF PLEKGVAPPW  240
WPTGKEEWWP ELGIPKDQGP PPYKKPHDLK KAWKVSVLTA VIKHMSPDIE KIRRLVRQSK  300
CLQDKMTAKE SATWLAVVKQ EEELYIKLHP DARPPPSSGS GVTGAISFNS SSSEYDVEGV  360
DDGKGEEVGN QKVAVDGNAF NLITAAGNEN FVVSGPLKEE TDVEFIQKRA AVEPEMMPNQ  420
RVFTCDNMQC MHNDVRFGFT DRNSRNTHQY LCKNQQSLSQ GISATTGGMQ MNENKPPVFF  480
VPLNAQPNPT GLGSSVNPIN ISDLGIPADG QKTINELMSF YENTINPNKN QGGMTMLDGQ  540
NSLQQKLQME DNFFGQGTGM GGNVFEEVGN LMQQQQFYGR EDMMPVEQQL GNQPADMGAD  600
INFGSGFNMS TMGYTDPLQK GMGELVQKPE YPSWFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-771993321134Protein ETHYLENE INSENSITIVE 3
4zds_B5e-771993321134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00367DAPTransfer from AT3G20770Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943685.10.0protein ETHYLENE-INSENSITIVE 3-like 1a
SwissprotQ8W3M00.0EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
TrEMBLA0A2H3XY140.0A0A2H3XY14_PHODC; ETHYLENE INSENSITIVE 3-like 1 protein
STRINGXP_008790465.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.11e-171EIL family protein
Publications ? help Back to Top
  1. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]