PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010943590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bHLH | ||||||||
Protein Properties | Length: 380aa MW: 41482.5 Da PI: 6.2323 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.5e-09 | 204 | 252 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+ l+P + +k Ka +L + ++Y++sLq XP_010943590.1 204 NSHSLAERIRRERISERMRFLQGLVPGC----NKITGKAVMLDEIINYVQSLQ 252 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 2.75E-16 | 199 | 268 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.4E-15 | 201 | 267 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.875 | 201 | 251 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.7E-6 | 204 | 252 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.3E-8 | 207 | 257 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MSACKEVSEM VAPGYYATGA AQFVASDWDP LLSVDQNVDF NGSAGHSSYN VGVPGSKGGS 60 IIDSNEQIPR LSSFGSESFT EMLSSFTLPA ATVPCPPDIP LGKEHETQKN LKGKKRKGMS 120 QCITPSPHSP AERVQDAEAG RQKDISPDSV KSSMDDENKQ KSEPNSSANS HDSTDELAKK 180 HSHNGGDAKD DHNHARAKRG QATNSHSLAE RIRRERISER MRFLQGLVPG CNKITGKAVM 240 LDEIINYVQS LQKQVEFLSM KLVAVNPELD LDIKQILSKD ILHSLHRSPA IPGFGMELNQ 300 THPHLHGSSS CEFKQAEMLL SSKPTTGDII RATNSHIFPL GQMQASSVWD AELQNIFQMG 360 LISNPLLDCD KLNGEMEVEP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 116 | QKNLKGKKRK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010943590.1 | 0.0 | transcription factor bHLH74 isoform X1 | ||||
Swissprot | Q6NKN9 | 6e-51 | BH074_ARATH; Transcription factor bHLH74 | ||||
TrEMBL | A0A2H3YI90 | 0.0 | A0A2H3YI90_PHODC; transcription factor bHLH74-like isoform X1 | ||||
STRING | XP_008798908.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP50900 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 2e-42 | bHLH family protein |
Publications ? help Back to Top | |||
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