 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010943487.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
bHLH |
| Protein Properties |
Length: 333aa MW: 36787.8 Da PI: 4.8838 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010943487.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 36.7 | 7.5e-12 | 168 | 210 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L
XP_010943487.1 168 MAERRRRKRLNDRLSLLRSIVPKiS------KMDRTSILGDTIDYVKEL 210
89*********************66......****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MELDEQSLLE ELFAPRGKTW DTSPTGTTKL LFSTEGGTDC FPETPSPVSP DYAPFEGLSF 60
QPEPIFDCLS EVCCPFGSGF FSAAPDFQTS CTMMTHSTIS LLAQDNEEIG LIHEEKNSTL 120
YDEQQSNCKV EPGQTVHTPS VFGGAGPCLE RKNGRQKKVE GLASKNLMAE RRRRKRLNDR 180
LSLLRSIVPK ISKMDRTSIL GDTIDYVKEL LERIKSLQQE AKVGTDELNL LNTLNGVKPN 240
EMLPRNSPKF NVERREGDTR LEICCAAKPG LLLSTVSTLE ALGLEIQQCA VSCFNDFGMR 300
ACCSEDKEQR AIIGSEEIKQ ALLRTAGYGG KCV
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 169 | 176 | ERRRRKRL |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Sharma N, et al.
NO FLOWERING IN SHORT DAY (NFL) is a bHLH transcription factor that promotes flowering specifically under short-day conditions in Arabidopsis.
Development, 2016. 143(4): p. 682-90
[PMID:26758694] - Chen YS, et al.
Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
Plant Mol. Biol., 2017. 93(3): p. 299-311
[PMID:27866313] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470]
|
