PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943317.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 546aa    MW: 59112.5 Da    PI: 6.5711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943317.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.35.6e-18240289255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h++ E+rRR++iN++f+ Lrel+P++    ++K +Ka+ L +++eYI+ Lq
  XP_010943317.1 240 RSKHSATEQRRRSKINDRFQILRELIPHS----DQKRDKASFLLEVIEYIRFLQ 289
                     889*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.9E-24235311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.015238288IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-19238313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.49E-17240293No hitNo description
PfamPF000102.1E-15240289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-13244294IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MRMELQGKKT THDFLSLYNK DSPFQHQDPR PPSQGCFLKT HDFLKPLEHA GKGRRDEAAS  60
GDIAVACVGP AEVGRAASVE HVLPGGIGTY SITHVSDPSP LAMVKPERGT CRGVDVERKP  120
EPYYANGVAY APQYAAGVPV ALWDESAAKD PGSRGQWQSS FAASGSGSFG SPSASRHHPA  180
PEKPRLMESA SRSSRGFDDE DDDDEEFGKR EGSSSHKELT VKLDGKGKGG DHDQRPNTPR  240
SKHSATEQRR RSKINDRFQI LRELIPHSDQ KRDKASFLLE VIEYIRFLQE KVQKYESSIP  300
GWSQDNTKLM PWNNNESPGD GISDPSQVMK NGSAPPGYMF SGSDNSIPVA PAMVSTAQNP  360
TDSDMAAGLS YKAMETPTNF ASKMAVTPIL LRPNLYSFIG RETSIAQSQQ RLVADADNMT  420
TQVQPQWLRP SGSADCAVSG EILNEQELTV DEGTISMSSA YSQGLLTTLT QALQSSGIDL  480
SQASISVQIN LGKRAINKRP AATVTTSGAK DHEDPVSANQ TMGHSRAGCS VEESSQAPKR  540
HKADNS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943317.10.0transcription factor BIM2 isoform X2
TrEMBLA0A2H3XUW60.0A0A2H3XUW6_PHODC; transcription factor BIM2 isoform X6
STRINGXP_008788920.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-53BES1-interacting Myc-like protein 2