PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943148.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 411aa    MW: 45277.2 Da    PI: 4.3283
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943148.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.47.2e-202313110128
             NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
                     tdeelv +++ ++ +g+++++ +vi+ev+ +++ePw+ p      e+ wy + ++d ++ +g+ +  +t+ gyWk+  +d ++++ ++ +vg k+
  XP_010943148.1  23 TDEELV-QFMGERKAGDPVPA-NVITEVNPFSIEPWNSP------EDIWYLYNPEDPQSLNGDSEFNVTRIGYWKSR-NDLRIFT-GTPTVGRKT 107
                     8*****.99999999***999.99**************9......467***************************76.6688888.8999***** PP

             NAM 105 tLvfykgrapkgektdWvmheyrl 128
                     +  fy g+ap+g++t W+mhey++
  XP_010943148.1 108 MREFYVGKAPNGNRTGWMMHEYQA 131
                     **********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-2613154IPR003441NAC domain
PROSITE profilePS5100530.74114154IPR003441NAC domain
PfamPF023654.1E-1019130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MSGSQMCPSA PVSVPPDINI LSTDEELVQF MGERKAGDPV PANVITEVNP FSIEPWNSPE  60
DIWYLYNPED PQSLNGDSEF NVTRIGYWKS RNDLRIFTGT PTVGRKTMRE FYVGKAPNGN  120
RTGWMMHEYQ AEQKTINGIN KEQDYSSLCR VFLQIDERPN HEEQHNSAIA DGAECDYVEY  180
ALLNILEQEE NNLSSRDAEN RSQTIGGDEQ GQSVLSGTSV TDPITDDRFE EKYATCDFSK  240
GDYLELNDLC SSETSSSSSD NSSLMSVNSD EFFDADALLR DLENDHNVRV EEEHGECRYN  300
VSASVKSNRV VIMPPTPGSV CSNSRSNLVV EGGTSANPIP EEARASEPSP SADELSHSGR  360
ASDSGKSPDS HSDQSSSDSS HGSRTSKGQG SKSAGRIAKL GKKYYCCFRS F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-22815211163NO APICAL MERISTEM PROTEIN
1ut4_B7e-22815211163NO APICAL MERISTEM PROTEIN
1ut7_A7e-22815211163NO APICAL MERISTEM PROTEIN
1ut7_B7e-22815211163NO APICAL MERISTEM PROTEIN
4dul_A7e-22815211163NAC domain-containing protein 19
4dul_B7e-22815211163NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943149.10.0NAC domain-containing protein 41 isoform X1
TrEMBLA0A2H3WYY40.0A0A2H3WYY4_PHODC; NAC domain-containing protein 105-like
STRINGXP_008775798.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.14e-27NAC domain containing protein 57