PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010942630.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 318aa    MW: 36227.8 Da    PI: 9.7718
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010942630.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.91.5e-1425119281
        trihelix   2 WtkqevlaLiearr.........emeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 
                     Wt +e+++Liea++         +        k              + + +W++v +++++ g+ rs++qC+++w+nl +++kk+++ e + + 
  XP_010942630.1  25 WTLNETMVLIEAKKtdnerrmkrS--------KeteekmggssssgrSSEMRWKWVEDYCWRYGCYRSQNQCNDRWDNLMRDFKKVRTYEMSFRV 111
                     *************95555544440........244444555555555****************************************99988766 PP

        trihelix  74 essstcpy 81 
                     e+s + +y
  XP_010942630.1 112 EESDRLSY 119
                     66655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.3871796IPR017877Myb-like domain
PfamPF138376.5E-1024106No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MTENRNMLVV VGGEERRRDY RKGNWTLNET MVLIEAKKTD NERRMKRSKE TEEKMGGSSS  60
SGRSSEMRWK WVEDYCWRYG CYRSQNQCND RWDNLMRDFK KVRTYEMSFR VEESDRLSYW  120
KLERHERKER NLPSSLLPEI YEALSEVVER RGVEGAGGSI SNMAGERHMG SISASVPPMM  180
QRNRPGTTPQ APGPPLPPAH ALLQAQAAGI IDSDDNEHSN SPERKRRREE SSSKSNSHKL  240
SSAISKCASI LAETFQASEE KEMRRHKDLM RIKERKAKIE QSKAETSVQS MDSLAAAINQ  300
LASSILGSVV DKGPAAPK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223227RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010942630.10.0trihelix transcription factor ASR3
TrEMBLA0A2H3XQR91e-169A0A2H3XQR9_PHODC; trihelix transcription factor ASR3
STRINGXP_008787373.11e-169(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32943571
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-44Trihelix family protein