PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_010942630.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Trihelix

Protein Properties

Length: 318aa MW: 36227.8 Da PI: 9.7718

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010942630.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.9	1.5e-14	25	119	2	81
trihelix 2 WtkqevlaLiearr.........emeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 Wt +e+++Liea++ + k + + +W++v +++++ g+ rs++qC+++w+nl +++kk+++ e + + XP_010942630.1 25 WTLNETMVLIEAKKtdnerrmkrS--------KeteekmggssssgrSSEMRWKWVEDYCWRYGCYRSQNQCNDRWDNLMRDFKKVRTYEMSFRV 111 ***********95555544440........244444555555555**************************************99988766 PP trihelix 74 essstcpy 81 e+s + +y XP_010942630.1 112 EESDRLSY 119 66655544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	7.387	17	96	IPR017877	Myb-like domain
Pfam	PF13837	6.5E-10	24	106	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MTENRNMLVV VGGEERRRDY RKGNWTLNET MVLIEAKKTD NERRMKRSKE TEEKMGGSSS 60 SGRSSEMRWK WVEDYCWRYG CYRSQNQCND RWDNLMRDFK KVRTYEMSFR VEESDRLSYW 120 KLERHERKER NLPSSLLPEI YEALSEVVER RGVEGAGGSI SNMAGERHMG SISASVPPMM 180 QRNRPGTTPQ APGPPLPPAH ALLQAQAAGI IDSDDNEHSN SPERKRRREE SSSKSNSHKL 240 SSAISKCASI LAETFQASEE KEMRRHKDLM RIKERKAKIE QSKAETSVQS MDSLAAAINQ 300 LASSILGSVV DKGPAAPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	227	RKRRR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010942630.1	0.0	trihelix transcription factor ASR3
TrEMBL	A0A2H3XQR9	1e-169	A0A2H3XQR9_PHODC; trihelix transcription factor ASR3
STRING	XP_008787373.1	1e-169	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3294	35	71

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-44	Trihelix family protein