PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010942495.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 343aa    MW: 37005.1 Da    PI: 7.1896
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010942495.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.12e-3348102155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     ++rlrWt++LHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_010942495.1  48 RQRLRWTHDLHERFVDAVTQLGGPDRATPKGVLRIMGVPGLTIYHVKSHLQKYRL 102
                     58****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.99145105IPR017930Myb domain
SuperFamilySSF466892.69E-1747102IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.0E-3247103IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-2549103IPR006447Myb domain, plants
PfamPF002492.8E-850101IPR001005SANT/Myb domain
PfamPF143792.7E-23138184IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MYQPKAISNL GSAHNNPLAR DQPLELTGHS MGPGSGGTNP NNPNLASRQR LRWTHDLHER  60
FVDAVTQLGG PDRATPKGVL RIMGVPGLTI YHVKSHLQKY RLAKYIPESS SDGRLQGSKA  120
EKKDPEDLLS GLENSSGIQI TEALKLQMEV QKRLHEQLEV QRQLQLRIEA QGKYLKKIIE  180
EQQRLSGVLA ETPGVSIPAP ISGDHCLDSD KTDPSTPAPT SESPLQDKAA SGDHGGTGGL  240
FKSLSRDDSF SSRREPLTPD SSCRAGSPES PRRERPIKRQ RGASGPGNGK TELVLAHHIL  300
ESSSGSEFHQ PCPIFPAGGG HFDSSGTSTC DDDRLENGSG SDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-2348105158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010942495.10.0myb family transcription factor PHL7 isoform X1
RefseqXP_019701372.10.0myb family transcription factor PHL7 isoform X1
RefseqXP_029116387.10.0myb family transcription factor PHL7 isoform X1
SwissprotQ9SJW01e-111PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2H3Y7Q90.0A0A2H3Y7Q9_PHODC; myb family transcription factor PHL7-like isoform X1
STRINGXP_008794707.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22203896
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-91G2-like family protein