PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010942092.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 535aa    MW: 57125.5 Da    PI: 6.8269
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010942092.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY863.5e-27199254359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     D ynWrKYGqK+vk+se+ rsYYrC++a+C+vkkkve+++ d++++ei+Y+g Hnhe
  XP_010942092.1 199 DDYNWRKYGQKQVKNSENIRSYYRCAYADCSVKKKVECCQ-DGHITEIVYSGCHNHE 254
                     99*************************************9.***************8 PP
2WRKY102.62.3e-32369426259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYG+K vkg+++prsYYrCt+ gCpv+k+vers+ed k ++itYeg+Hnh+
  XP_010942092.1 369 SDGYRWRKYGRKFVKGNPNPRSYYRCTHIGCPVRKHVERSSEDAKSMVITYEGKHNHD 426
                     7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.1E-25188256IPR003657WRKY domain
PROSITE profilePS5081118.544192256IPR003657WRKY domain
SuperFamilySSF1182901.03E-21197256IPR003657WRKY domain
SMARTSM007741.6E-27197255IPR003657WRKY domain
PfamPF031061.5E-20199254IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.5E-33353428IPR003657WRKY domain
SuperFamilySSF1182906.28E-28361428IPR003657WRKY domain
PROSITE profilePS5081134.658363428IPR003657WRKY domain
SMARTSM007741.9E-36368427IPR003657WRKY domain
PfamPF031062.5E-25370426IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    Send to blast
MAEEPGSGAP EHDKAVREGS TESASSPPVA AEGGDSKTLA PPDSSSQPGG DGGSASDHRS  60
FSQLLAGAMA SATAGSTGAA PFLAVPVVTI PCYIAPAAGL TGQFAMTHQA VLASVTAQAL  120
MQLQKAYPSS SSDFLRNSVP QPQISNITLL PLQQDPLLVA GNTACSPETE QPPPSHQKPQ  180
SASIVVKTSS DDEKTGSGDD YNWRKYGQKQ VKNSENIRSY YRCAYADCSV KKKVECCQDG  240
HITEIVYSGC HNHEPPLKIR SSRERKAKRS APTVVNKKID LPGAEINAAV SSASKLQQSS  300
GNETLEQHLP CSDGHEGDSA VKTEEDLGDR PDPKRRSTES TMLDPAPVFK TIRETKIILQ  360
TACDVGLASD GYRWRKYGRK FVKGNPNPRS YYRCTHIGCP VRKHVERSSE DAKSMVITYE  420
GKHNHDLPPL KYGSDPPDSA LLTAAAATAM TTNKQTSRND PSYETPATKW LPDVDGKIFN  480
EQVQELGGEK AIESAQTLLT MGLSSTSESV GSKNSGGIQQ PRLNGNYAVV PVENS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-28359428877Probable WRKY transcription factor 4
2lex_A1e-28359428877Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010942092.10.0probable WRKY transcription factor 32
TrEMBLA0A2H3YU710.0A0A2H3YU71_PHODC; probable WRKY transcription factor 4 isoform X1
STRINGXP_008803718.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-74WRKY DNA-binding protein 4