PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010941472.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 359aa MW: 39759.8 Da PI: 4.1776

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010941472.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	29.2	2e-09	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+++g+t+ +v+SHLQkYRl XP_010941472.1 1 MKHMNIEGITRRQVASHLQKYRL 23 799*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.4E-8	1	26	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
MKHMNIEGIT RRQVASHLQK YRLKEKNMPF SPSIPDMFGP GTEMAQFKQV SNQYGLFTTQ 60 GCLNCVTLKP SVPVTQMLSF GLQLPLSFNS YPNLTCMQSC NDNSGLHQPK NESQNQLASH 120 FGMTAEIPSL QSTSTFATNV NNVMGLGGVI PCSFEAAIQT QQLNTDVQFS SSFRAITQMQ 180 QFDCGTRVSE SFREIHQPQL LNDMDEISDS SCNLVSEYTD AGLVGNNSND IDATQCKANE 240 QHTHLVSENI MTNDACVDGA ATNANQFSIT DSEQQHNVSE ENTLLVSEYT RNDLTTNGAV 300 INANQSSVNN FEQQYAGSHV VENSKVVEEE DLNHSTEDFA CGDDSWLLML EDSFEFDFI

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

MKHMNIEGIT RRQVASHLQK YRLKEKNMPF SPSIPDMFGP GTEMAQFKQV SNQYGLFTTQ  60
GCLNCVTLKP SVPVTQMLSF GLQLPLSFNS YPNLTCMQSC NDNSGLHQPK NESQNQLASH  120
FGMTAEIPSL QSTSTFATNV NNVMGLGGVI PCSFEAAIQT QQLNTDVQFS SSFRAITQMQ  180
QFDCGTRVSE SFREIHQPQL LNDMDEISDS SCNLVSEYTD AGLVGNNSND IDATQCKANE  240
QHTHLVSENI MTNDACVDGA ATNANQFSIT DSEQQHNVSE ENTLLVSEYT RNDLTTNGAV  300
INANQSSVNN FEQQYAGSHV VENSKVVEEE DLNHSTEDFA CGDDSWLLML EDSFEFDFI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029116195.1	0.0	LOW QUALITY PROTEIN: two-component response regulator ARR1
TrEMBL	A0A2H3YXE9	1e-156	A0A2H3YXE9_PHODC; two-component response regulator ORR24-like
STRING	XP_008805335.1	1e-157	(Phoenix dactylifera)