PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010940086.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 334aa    MW: 37217.8 Da    PI: 7.4999
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010940086.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-10145192455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR+ri +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_010940086.1 145 SHSLAERVRRERISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 192
                     8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-17139210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.50E-10139196No hitNo description
Gene3DG3DSA:4.10.280.105.9E-17141208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.605141191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-7145192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-9147197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MDDYVCNAGD LVPLPTSMQS LNNSNDHDTS GTASYIHDQI GIHDTRPPII SSIANDAGKE  60
TSTKNSRKRK VENISNQKVG CGNTTKDGTK DKRMKEGTER GGATEESQKA NSKKEASGDA  120
SKRSMKPAKS ECIHVRARRG QATDSHSLAE RVRRERISER MKYLQDLVPG CNKITGKAGM  180
LDEIINYVQS LQRQVEFLSM KLAAVNPRLD FHIDNFFDRE IDLACNPGVM PMFDMPSKQW  240
NPYIQFNSLH PTTACCGFDV DMCSSDRILG RTMSMSMPAL LPDTILDSSL NVHRSSSYPS  300
SWDIAGLHNI YGVEFYQGRR PDLPFQSLQG DNFP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010940086.10.0transcription factor bHLH63 isoform X1
TrEMBLA0A2H3YAS21e-167A0A2H3YAS2_PHODC; transcription factor BHLH094-like
STRINGXP_008795935.11e-168(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP82523749
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-54cryptochrome-interacting basic-helix-loop-helix 1