PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939706.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 327aa    MW: 36231.9 Da    PI: 6.9173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939706.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438.1e-14121172155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ +r+l+P++   + ++ + a+i   A++Y+k+L+
  XP_010939706.1 121 QRMTHIAVERNRRKQMNEYLSSIRSLMPPS---YVQRGDQASIIGGAINYVKELE 172
                     79****************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.3E-13119176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.35E-13119176No hitNo description
SuperFamilySSF474597.07E-17120187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-11121172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.4E-10126177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MALDAAVFPQ DPFGCTMKEF YTLGGVWNYG FGGLEGKGVV VECKMDGGVG GGVRQEQGKG  60
VVDGVHGNWD SSCSSLVQNL EEWDVNSSPP SETGGRETAM RGRRKRRRTK SFKNKEEVEN  120
QRMTHIAVER NRRKQMNEYL SSIRSLMPPS YVQRGDQASI IGGAINYVKE LEQLLQSLEV  180
QKRLKQRSDT VPFADFFTFP QYSSCSSQSA NGAATTTTAA AAINTNATEI MAENRSAIAD  240
IEVMMVDSHA NLKVLSRRRP KQLLKLVVGL QNLQLTTLHL NVTTMDEMVL YSFSLKVEDD  300
CQYTSVDEIA TAVYQMVGKI QQSSDLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103107RKRRR
2103108RKRRRT
3121132RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939706.10.0transcription factor bHLH94
TrEMBLA0A2H3X1M11e-146A0A2H3X1M1_PHODC; transcription factor bHLH96-like
STRINGXP_008776945.11e-170(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74138156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-58bHLH family protein