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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010939701.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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| Family |
HD-ZIP |
| Protein Properties |
Length: 293aa MW: 32902.4 Da PI: 4.6893 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010939701.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58.2 | 1.4e-18 | 57 | 110 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe ++++ +++ +LA+ lgL+ rqV +WFqNrRa++k
XP_010939701.1 57 KKRRLSVDQVRALEKNFEVENKLEPDRKVRLAHDLGLQPRQVAIWFQNRRARWK 110
456899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 129 | 2e-41 | 56 | 148 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls +qv++LE++Fe e+kLep+rKv+la++Lglqprqva+WFqnrRAR+ktkqlE+dy+aLk +y+al+ + ++L +++e+L +e+k
XP_010939701.1 56 EKKRRLSVDQVRALEKNFEVENKLEPDRKVRLAHDLGLQPRQVAIWFQNRRARWKTKQLERDYAALKGSYEALRVDFDALYRDKEALLNEIKM 148
69*************************************************************************************999975 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009637 | Biological Process | response to blue light |
| GO:0030308 | Biological Process | negative regulation of cell growth |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0048573 | Biological Process | photoperiodism, flowering |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MKRVSSSDYL IPFCPTDEGK GMYERGFQPM IDGLGEEECG DEEMCSSGSG GGGGGEKKRR 60
LSVDQVRALE KNFEVENKLE PDRKVRLAHD LGLQPRQVAI WFQNRRARWK TKQLERDYAA 120
LKGSYEALRV DFDALYRDKE ALLNEIKMLK EKLAEEESAS FSSVKQESVA LESQNKVSEE 180
PPAPVYKDGS SDSDSSAVLN DENSPHGRRM SSSTAFETFS AAIGFENSTS FPCSPPSLLN 240
SDARQQKGGI FFQHQLLKTE DHGFLSSEEP CSSFLSDDQA AILNWYYYSE HWT
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 104 | 112 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. May be involved in the regulation of gibberellin signaling. {ECO:0000269|PubMed:10732669, ECO:0000269|PubMed:18049796}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
| UniProt | INDUCTION: By gibberellin. Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151, ECO:0000269|PubMed:18049796}. |
