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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010939525.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
bHLH |
| Protein Properties |
Length: 248aa MW: 27423.8 Da PI: 7.0942 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010939525.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 19.5 | 1.7e-06 | 36 | 85 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+++ + +rE+ Rd++N++f+eL + +a + + Ka+iL A++ +++L
XP_010939525.1 36 KKEHKAKREKLKRDHLNERFSELGHAVEPA----RQNNGKASILGDATRLVQDL 85
5778899**********************9....67899999**9999988876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MVTEPPSSMT NDGNIVAEQP VGGSIPNKKN KGKVPKKEHK AKREKLKRDH LNERFSELGH 60
AVEPARQNNG KASILGDATR LVQDLIQQVE SLKKENAALV TESHYVAVEK NELKDENTVL 120
GAEIERLRNE LHERMHSNPM WHDGAEVALP APPQPTAAAL PMQQPPVGPL YVIPLHQELH 180
PFSETGDAPA PPKHPSHVRR PHARYPTPSD SWPLELLSRH QRAAHEAQHK GSSSCMTSNR 240
GEEGADEV
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress. {ECO:0000269|PubMed:25617318}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yilmaz A, et al.
GRASSIUS: a platform for comparative regulatory genomics across the grasses.
Plant Physiol., 2009. 149(1): p. 171-80
[PMID:18987217] - Wu H,Ye H,Yao R,Zhang T,Xiong L
OsJAZ9 acts as a transcriptional regulator in jasmonate signaling and modulates salt stress tolerance in rice.
Plant Sci., 2015. 232: p. 1-12
[PMID:25617318]
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