PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010939413.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 387aa MW: 40291.3 Da PI: 9.5971

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010939413.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.6	1.7e-15	332	383	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+a+N++L+k+ ee+ ++ XP_010939413.1 332 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKAQNQDLQKKQEEMMEMQ 383 79******************************************99999885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-11	328	387	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.105	330	381	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.27E-10	332	381	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-14	332	381	No hit	No description
Pfam	PF00170	2.0E-13	332	384	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.43E-26	332	386	No hit	No description
PROSITE pattern	PS00036	0	335	350	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence Send to blast
MMNLKNMGSS DGKDGRPPAQ LPLARQPSVY SLTFDEFQST LGGVGKDFGS MNMDELLKNI 60 WTAEESQAMA TALGGAGGAV GGGGLDGSGA GIGLQRQGSL TLPRTLSQKT VDEVWKDLIR 120 ESGLGSSSGT ELHQQRQPTL GEMTLEEFLV RAGVVREDMA MAAAPRPIGN SSNTNNNTNS 180 NVFYGELPNS NNNTGLALGF SQTGRGNGCV VTNTITNSSG ANLGIPATGT RPYAAPLPLG 240 NTADLGNPQG MRGVGIVGLG DQGVNNGLMP GVVGLGGGGV TVGVVGSPVN QMSTNGLGKG 300 GDLSSLSPVP YVLSGGLRGR KGGGAVEKVV ERRQRRMIKN RESAARSRAR KQAYTMELEA 360 EVAKLKAQNQ DLQKKQEEMM EMQKNQQ

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence Send to blast

MMNLKNMGSS DGKDGRPPAQ LPLARQPSVY SLTFDEFQST LGGVGKDFGS MNMDELLKNI  60
WTAEESQAMA TALGGAGGAV GGGGLDGSGA GIGLQRQGSL TLPRTLSQKT VDEVWKDLIR  120
ESGLGSSSGT ELHQQRQPTL GEMTLEEFLV RAGVVREDMA MAAAPRPIGN SSNTNNNTNS  180
NVFYGELPNS NNNTGLALGF SQTGRGNGCV VTNTITNSSG ANLGIPATGT RPYAAPLPLG  240
NTADLGNPQG MRGVGIVGLG DQGVNNGLMP GVVGLGGGGV TVGVVGSPVN QMSTNGLGKG  300
GDLSSLSPVP YVLSGGLRGR KGGGAVEKVV ERRQRRMIKN RESAARSRAR KQAYTMELEA  360
EVAKLKAQNQ DLQKKQEEMM EMQKNQQ

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010939413.1	0.0	bZIP transcription factor 46 isoform X2
Swissprot	Q9M7Q4	3e-99	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A2H3YE37	0.0	A0A2H3YE37_PHODC; bZIP transcription factor TRAB1 isoform X2
STRING	XP_008797272.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	1e-44	ABRE binding factor 4

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]