PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939214.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family YABBY
Protein Properties Length: 171aa    MW: 19024 Da    PI: 8.6351
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939214.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY56.41.3e-17261261
           YABBY  2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61
                    d++  +e+vCyv+C++Cnt+lav vP + l+ +vtv+CGhC +l  ++ + ++q+   ++
  XP_010939214.1  2 DLVPPTEHVCYVRCTYCNTVLAVGVPCKWLMDTVTVKCGHCNHLSFLSPRPMMQTFCPTD 61
                    77889************************************9986666555555554444 PP
2YABBY94.72.2e-297714495162
           YABBY  95 svsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                     + ss + s+++++ +p++  v++PPek+ r Psaynrf+keeiqrika+ Pdi hreafs+aaknWa 
  XP_010939214.1  77 QPSSPSSSTSSEKMIPKASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAAKPDIPHREAFSMAAKNWAK 144
                     44555568899999****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046908.5E-496145IPR006780YABBY protein
SuperFamilySSF470952.09E-894146IPR009071High mobility group box domain
Gene3DG3DSA:1.10.30.101.0E-599146IPR009071High mobility group box domain
CDDcd013905.50E-6106147No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MDLVPPTEHV CYVRCTYCNT VLAVGVPCKW LMDTVTVKCG HCNHLSFLSP RPMMQTFCPT  60
DHQMAFQGPC NDCWRGQPSS PSSSTSSEKM IPKASFVVKP PEKKHRLPSA YNRFMKEEIQ  120
RIKAAKPDIP HREAFSMAAK NWAKCDPRCS TTVSASDGAA GTVIFPHSLS F
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939214.11e-126protein DROOPING LEAF isoform X2
SwissprotQ76EJ02e-82YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A2H3XLR81e-106A0A2H3XLR8_PHODC; protein DROOPING LEAF
STRINGXP_008785629.11e-106(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.17e-52YABBY family protein