PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939213.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family YABBY
Protein Properties Length: 188aa    MW: 21053.2 Da    PI: 8.3606
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939213.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY56.31.4e-17258258
           YABBY  2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqlla 58
                    d++  +e+vCyv+C++Cnt+lav vP + l+ +vtv+CGhC +l  ++ + ++q+  
  XP_010939213.1  2 DLVPPTEHVCYVRCTYCNTVLAVGVPCKWLMDTVTVKCGHCNHLSFLSPRPMMQTFC 58
                    77889************************************9986665555555544 PP
2YABBY94.72.2e-297914497162
           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                     ss + s+++++ +p++  v++PPek+ r Psaynrf+keeiqrika+ Pdi hreafs+aaknWa 
  XP_010939213.1  79 SSPSSSTSSEKMIPKASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAAKPDIPHREAFSMAAKNWAK 144
                     4445578899999***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF046901.9E-486145IPR006780YABBY protein
SuperFamilySSF470952.49E-894146IPR009071High mobility group box domain
Gene3DG3DSA:1.10.30.101.2E-599146IPR009071High mobility group box domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007275Biological Processmulticellular organism development
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MDLVPPTEHV CYVRCTYCNT VLAVGVPCKW LMDTVTVKCG HCNHLSFLSP RPMMQTFCPT  60
DHQMAFQGPC NDCWRGQPSS PSSSTSSEKM IPKASFVVKP PEKKHRLPSA YNRFMKEEIQ  120
RIKAAKPDIP HREAFSMAAK NWAKCDPRCS TTVSASDGAA GTVIFPHEGE NGLTVERFDA  180
FKQLERKD
Functional Description ? help Back to Top
Source Description
UniProtRegulates carpel specification in flower development. Severe or intermediate mutation in DL causes complete or partial homeotic conversion of carpels into stamens without affecting the identities of other floral organs. Interacts antagonistically with class B genes and controls floral meristem determinacy. Regulates midrib formation in leaves probably by inducing cell proliferation in the central region of the leaf. {ECO:0000269|PubMed:14729915}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939213.11e-141protein DROOPING LEAF isoform X1
SwissprotQ76EJ02e-87YABDL_ORYSJ; Protein DROOPING LEAF
TrEMBLA0A2H3XLR81e-120A0A2H3XLR8_PHODC; protein DROOPING LEAF
STRINGXP_008785629.11e-121(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP59513657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.11e-51YABBY family protein