PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010938283.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 424aa MW: 46744.8 Da PI: 6.9358

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010938283.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.9	4.9e-10	228	270	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++E++RR+ri ++++ L++l+P++ +K + a+i A++Y+++L XP_010938283.1 228 KNEKQRRERIAKKYDDLKSLIPNS-----TKQDRASIIADATDYVNEL 270 58*******************9.....9************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.614	221	270	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	6.7E-10	227	276	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.1E-7	228	270	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.49E-11	229	287	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.21E-10	230	275	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.4E-9	230	282	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence Send to blast
MHHQSEYFGP NEAISIQGGA GAFGGPSQSN TISHSDLALM GSSSNNGSNM EENLRLFRFL 60 HEDPNVHHPT SAMGLDLQCQ PGLDPRADKI TTTSLMQANN HQYYFDPTTP LNPLVIGMLN 120 PGNFHYTADM FSGELPPDST STGSTILHDP MVHLDFPSQP SLVKDVLNSL PHDTGFFPGT 180 MGFGGSFVGG LDDGYDGQLG RQRSDKKGRK GGSKKGGSIK VEEAGSLKNE KQRRERIAKK 240 YDDLKSLIPN STKQDRASII ADATDYVNEL LRTLKELKIL VAEKRHRREW GKKLIMGDGV 300 DGDVESSSMK PLMGDGDRAF RGSLRSSWIQ RKSRETFVDV RITEDEVYIK LTQRKKMNCL 360 VVVSKVLDEL QLELLHLSGG NIGDSHIFIF NTKIHEGSSV YASAVAKKLI EVLDVQYPPL 420 PVSF

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence Send to blast

MHHQSEYFGP NEAISIQGGA GAFGGPSQSN TISHSDLALM GSSSNNGSNM EENLRLFRFL  60
HEDPNVHHPT SAMGLDLQCQ PGLDPRADKI TTTSLMQANN HQYYFDPTTP LNPLVIGMLN  120
PGNFHYTADM FSGELPPDST STGSTILHDP MVHLDFPSQP SLVKDVLNSL PHDTGFFPGT  180
MGFGGSFVGG LDDGYDGQLG RQRSDKKGRK GGSKKGGSIK VEEAGSLKNE KQRRERIAKK  240
YDDLKSLIPN STKQDRASII ADATDYVNEL LRTLKELKIL VAEKRHRREW GKKLIMGDGV  300
DGDVESSSMK PLMGDGDRAF RGSLRSSWIQ RKSRETFVDV RITEDEVYIK LTQRKKMNCL  360
VVVSKVLDEL QLELLHLSGG NIGDSHIFIF NTKIHEGSSV YASAVAKKLI EVLDVQYPPL  420
PVSF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010938283.1	0.0	transcription factor EAT1-like
TrEMBL	A0A2H3Y4T2	0.0	A0A2H3Y4T2_PHODC; transcription factor EAT1-like
STRING	XP_008793418.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1904	37	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06170.2	4e-47	bHLH family protein