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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_010937067.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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| Family |
HD-ZIP |
| Protein Properties |
Length: 282aa MW: 31981.8 Da PI: 7.5426 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010937067.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55.5 | 9.4e-18 | 83 | 136 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+ +++ eq+++Le+ Fe+ +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
XP_010937067.1 83 KKKRLNLEQVRTLERNFEMGNKLEPERKIQLARALGLQPRQIAIWFQNRRARWK 136
45568889*********************************************9 PP
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| 2 | HD-ZIP_I/II | 127.9 | 4.3e-41 | 82 | 172 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekk+rl+ eqv++LE++Fe+ +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+aLkr+++a+k+en++L++++++L++e+
XP_010937067.1 82 EKKKRLNLEQVRTLERNFEMGNKLEPERKIQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDALKRQFEAVKAENDALKAQNKKLQAEI 172
69**************************************************************************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MFNNQITCNG MPASFPTNFL LPHEESHHPP TSLSPLLPTN PQDFRGVATM LGKRSMSFSG 60
VEACEAMNAE DELSDDCSQV AEKKKRLNLE QVRTLERNFE MGNKLEPERK IQLARALGLQ 120
PRQIAIWFQN RRARWKTKQL EKDYDALKRQ FEAVKAENDA LKAQNKKLQA EILALKGRER 180
TEPINLNKET EGSCSNKSEN SSDINLGTSR TPATGSPSNP HQSRSFLAYR SPSVAQLLQS 240
SSKAETQGPK MEHGIQEENF NMFCSIEDQT AFWSWSEQHN FH
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 130 | 138 | RRARWKTKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that may act in the sucrose-signaling pathway. {ECO:0000269|PubMed:11292072}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ribone PA,Capella M,Chan RL
Functional characterization of the homeodomain leucine zipper I transcription factor AtHB13 reveals a crucial role in Arabidopsis development.
J. Exp. Bot., 2015. 66(19): p. 5929-43
[PMID:26136262] - Wang X, et al.
Overexpressed BRH1, a RING finger gene, alters rosette leaf shape in Arabidopsis thaliana.
Sci China Life Sci, 2018. 61(1): p. 79-87
[PMID:28887625] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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