 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010936881.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
bZIP |
| Protein Properties |
Length: 445aa MW: 47887.9 Da PI: 9.2708 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010936881.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 62.7 | 7.2e-20 | 355 | 417 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v + ++eN +Lk+el++++ e++kl+se+
XP_010936881.1 355 ERELKRQKRKQSNRESARRSRLRKQAECEELANRVVTQKEENNSLKEELKRMRGECDKLTSEN 417
89***********************************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 445 aa
Download sequence Send
to blast |
MGSGEVNTPT KTQKPTFTQE QPPSSPAMVY PDWASFQFLL TYRHIIMLLE QVLCLLRGFS 60
ILMWHRVHKG AHICGVHRYL LLLLFAIIFI IYNLVLGGCC NDACLSLQRT GFSSKKKGQV 120
SLIISPYRTP PFVSMYPHGG IYPHPSIPPG SYQYSPYPMP STNGIAEASV AGASGTETDG 180
KLHGGKERSP LKKSSGSLGS LNMLTGKVNK TGKASSGSAN GVFSQSGESG SEGSSEGSDA 240
NSQNGSRLKH GSEHGSGDEE AQKGRTGQTT SNEVTQTLST PIVLNPTVPF VTIPPGGLVG 300
PTTTLNIGMD YWGGSASVSA VRGKVPSAPS TAPFVPSRLA GSRDKVPPDP SIQDERELKR 360
QKRKQSNRES ARRSRLRKQA ECEELANRVV TQKEENNSLK EELKRMRGEC DKLTSENATL 420
AEKLGKHLGD ESRSDEQVDS VNGDG
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 371 | 377 | RRSRLRK |
| 2 | 371 | 378 | RRSRLRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT2G35530.1 | 3e-68 | basic region/leucine zipper transcription factor 16 |
