PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010936187.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 385aa MW: 42368.7 Da PI: 6.5648

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010936187.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.7	5.6e-10	211	259	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_010936187.1 211 NSHSLAERVRREKISERMRLLQDLVPGC----NKIIGKAVMLDEIINYVQSLQ 259 58************************....999***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.7E-16	206	276	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.231	208	258	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.8E-16	211	276	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.8E-7	211	259	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.79E-10	212	263	No hit	No description
SMART	SM00353	1.8E-9	214	264	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence Send to blast
MYSAQQSNQA VRTSSMTTPC SSVNVTEQYL VTDWNSFVPV DQNMEFNGSS SISCYNVRIP 60 LNQETNCSIG DTLPSSFGNE SFPEMVSSFD LSKSCQISSA IGPPNSPLTN DHSFGKYFKG 120 KKRKHMAESG AVSPHSPLDR IQPEAEQKKD VSPESLKTPI EKDEREQKSE LYPGVTTHKQ 180 AAKHAKEHLQ DGDAPKEDYI HVRAKHGQAT NSHSLAERVR REKISERMRL LQDLVPGCNK 240 IIGKAVMLDE IINYVQSLQR QVEFLSMKLA AVSPELNLNI EQILLKDILH AQDGGSAVLG 300 FGSGMSSLHP HLYGSSTRGV MRTEIMQNVP NSGDMLRAAP PHISPMAQIS SAWHDELQNI 360 VQMGFVPDAP ATGGTEHNGS MKVEL

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence Send to blast

MYSAQQSNQA VRTSSMTTPC SSVNVTEQYL VTDWNSFVPV DQNMEFNGSS SISCYNVRIP  60
LNQETNCSIG DTLPSSFGNE SFPEMVSSFD LSKSCQISSA IGPPNSPLTN DHSFGKYFKG  120
KKRKHMAESG AVSPHSPLDR IQPEAEQKKD VSPESLKTPI EKDEREQKSE LYPGVTTHKQ  180
AAKHAKEHLQ DGDAPKEDYI HVRAKHGQAT NSHSLAERVR REKISERMRL LQDLVPGCNK  240
IIGKAVMLDE IINYVQSLQR QVEFLSMKLA AVSPELNLNI EQILLKDILH AQDGGSAVLG  300
FGSGMSSLHP HLYGSSTRGV MRTEIMQNVP NSGDMLRAAP PHISPMAQIS SAWHDELQNI  360
VQMGFVPDAP ATGGTEHNGS MKVEL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010936187.1	0.0	transcription factor bHLH74 isoform X1
Refseq	XP_019710015.1	0.0	transcription factor bHLH74 isoform X1
Refseq	XP_029123879.1	0.0	transcription factor bHLH74 isoform X1
TrEMBL	A0A3Q0HXH4	0.0	A0A3Q0HXH4_PHODC; transcription factor bHLH74-like
STRING	XP_008785728.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6033	36	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-60	bHLH family protein