PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934164.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 447aa    MW: 49492.4 Da    PI: 5.904
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934164.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.1e-12220271155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r+ah ++Er+RR+ +N+ ++ Lr l+P++     k+ + a+i   A++++k+L+
  XP_010934164.1 220 QRMAHIAVERNRRQLMNDHLAALRALMPPS---FVKRGDQASIIGGAIDFVKELE 271
                     79***************************9...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.8E-12218273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.97E-9218268No hitNo description
SuperFamilySSF474591.57E-14218283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.837219270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-9220271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.7E-9225276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
SVLWKRRGWA ERFLRSSESE VLPNSNEEVP GRINAFIQLI GEEMSLECLE PEVRSPSSVT  60
EMTYGSLIPG HYHHTPFLQL LQSAMQAEEE TEEREEQQLP LQVLQQQQQQ QQQQALFTSF  120
PLESNLQLLL RLQSHEHNKW TAEIDSSRAA EQLESCVTHA SESQADARGV DGHEPGHDRQ  180
IPSETTRSTT AAGSRERTKR KRSRAASVAS TKSAEEAESQ RMAHIAVERN RRQLMNDHLA  240
ALRALMPPSF VKRGDQASII GGAIDFVKEL EQLLLFLQAK KRLRMSAATT AGTSAASSTC  300
TTLSRSTTSE DEGCPVPAPA TAASLEGFFI SPQYTSYSQS QQQHRRVKED GEESPAAEEG  360
VDVEAIVVQG HVNLKVAGRR RAGQLVRAIS ALEELRLSVL HLNIISLDPS SIVYSLNLKM  420
EEGCKLGSAD EIATAMHQIF GYINACR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220231RMAHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019709192.10.0transcription factor bHLH57 isoform X2
TrEMBLA0A3Q0HZ850.0A0A3Q0HZ85_PHODC; transcription factor bHLH57-like
STRINGXP_008783537.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79573344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.13e-51bHLH family protein