PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_010934103.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 309aa MW: 33575.4 Da PI: 10.33

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010934103.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50	6.4e-16	239	290	4	55
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L +eN +Lkk+ eel+ XP_010934103.1 239 DRRYKRMIKNRESAARSRARKQAYTNELELEVAHLLEENAKLKKQHEELRMA 290 5799*****************************************9999865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.1E-12	236	300	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.266	238	288	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.7E-14	240	289	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.7E-14	240	291	No hit	No description
CDD	cd14707	9.38E-26	240	294	No hit	No description
SuperFamily	SSF57959	5.81E-12	240	289	No hit	No description
PROSITE pattern	PS00036	0	243	258	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MWSSENDKHN SSSRNNNNNS GHGSSSRIVS SSSTRSSPSS TSSILPQTPR RTMEEVWKDI 60 SPATLHQEKP LAPLMETTQS HPHHHNHHHH RHLHLHRAHP TASPSFRTMI LQDFLSGPCS 120 TVSPAAAAME HIPLPPSSPP LPPTTLSLNS GLELRCLSGG GGAGGGGGGG SLLGNARSRS 180 CSNSNESRDN GQAHKNGHGG SFMPSYFSDA VIGPPSPAGF FSFCAKKRMM PEGPVIDGDR 240 RYKRMIKNRE SAARSRARKQ AYTNELELEV AHLLEENAKL KKQHEELRMA MADQLPNRNA 300 LQRSSSSPF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010934103.1	0.0	protein FD
TrEMBL	A0A2H3X975	1e-88	A0A2H3X975_PHODC; protein FD-like
STRING	XP_008780307.1	2e-89	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9764	30	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	9e-22	bZIP family protein