PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934047.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 268aa    MW: 29221.6 Da    PI: 7.5102
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934047.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.3e-11150197455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  XP_010934047.1 150 SHSLAERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 197
                     8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.28E-11144201No hitNo description
SuperFamilySSF474593.53E-18144214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.221146196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-19146216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-8150197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-11152202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MDPPSLVSQV PVPEMWQFPT VRVPPSGPRV GRMVPGPEVA AVGNRDASLD ESTVTEQSGG  60
SRGRRKRRDS ASEDESSKLA STSSGNDLTD SEVKRLKAIK STNETSNLKT EAEASSGICN  120
KTVDQNPSPT EPAKQDYIHV RARRGQATDS HSLAERARRE KISERMKILQ DLVPGCNKVI  180
GKASVLDEII NYIQALQRQV EFLSMKLEAV NSRINAGIEG FPTKDFGAQT YDTTSSLAFS  240
TQPAREYGQG SATEWLHMQV GGAFERVT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that may regulate jasmonate-regulated genes. {ECO:0000250|UniProtKB:Q69WS3}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934047.10.0transcription factor BHLH089 isoform X1
SwissprotQ84T088e-96BH089_ORYSJ; Transcription factor BHLH089
TrEMBLA0A2H3Z5L81e-170A0A2H3Z5L8_PHODC; transcription factor BHLH089-like isoform X1
STRINGXP_008808720.11e-171(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30653577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-77BIG PETAL P
Publications ? help Back to Top
  1. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]