PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933992.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TALE
Protein Properties Length: 596aa    MW: 66685.5 Da    PI: 6.6622
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933992.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.88.7e-093644011954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yps  ++  LA+++gL+ +qV +WF N R +
  XP_010933992.1 364 FEHflHPYPSDVDKHILARQTGLSRSQVNNWFINARVR 401
                     664459******************************88 PP
2BELL109.71.8e-35227296372
            BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                      elqk+ka L s+leeVd+rYk+y+eq++tv+ssFeavag g+a++Y  lA+ka+S+hFrcL+d i++qi
  XP_010933992.1 227 IELQKRKAELSSMLEEVDRRYKKYCEQMRTVVSSFEAVAGEGAARVYSILASKAMSKHFRCLRDGIVGQI 296
                     69******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005745.3E-57164294IPR006563POX domain
PfamPF075262.3E-45170292IPR006563POX domain
PROSITE profilePS5007112.195342405IPR001356Homeobox domain
CDDcd000861.65E-11345406No hitNo description
SMARTSM003895.8E-9345409IPR001356Homeobox domain
SuperFamilySSF466893.12E-17346411IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.1E-28348411IPR009057Homeodomain-like
PfamPF059205.5E-18362401IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
MAHHHPEKLG TLISPAFSYD DFSSTRNSMI QSFEPNQELY SLQAGMEMLG RGFFPKVGSS  60
SSSIGGELSH SSNENLMVTA ETAVTATMMN SWQRSNRMLV EDSSLRCLLP TDGNQQPSQG  120
LSLSLCNPEP SEAIDGMEHA FRQQHLFSKP TEVLEDRRLF PQSHQQVQQL KHSKYLTPAQ  180
ELLNEFCSLG AGSSSSKHKS HKTNQWEEGG SSSNSSWNQS LYSLDIIELQ KRKAELSSML  240
EEVDRRYKKY CEQMRTVVSS FEAVAGEGAA RVYSILASKA MSKHFRCLRD GIVGQIQVTK  300
KAMGEKDPVA PGTTRGETPR LKLLDQCLRQ QKAFQQAGMM ESHPWRPQRG LPERSVSILR  360
AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VNNWFINARV RLWKPMVEEM YLEEIKEKDR  420
QTPNEENSND NNPGPGNPNP NSSSLQLLAE DQKPTLGQLL NDSDSLSSIV NSSHHRTDGR  480
DPTNNKISYR DPRRPHHPAV PRAENFGVVD LDFTSYGECS NPNFGGGGVS LTLGLQQHNG  540
GGMSLSFSPA SQHSLLFSRE QMEDCQPGQF SILDGEAQNL PYRNLMEAQL LHDLAG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-16351409563Homeobox protein Meis2
3k2a_B2e-16351409563Homeobox protein Meis2
4xrm_A3e-16351409563Homeobox protein Meis2
4xrm_B3e-16351409563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010933991.10.0homeobox protein BEL1 homolog
RefseqXP_010933992.10.0homeobox protein BEL1 homolog
RefseqXP_010933993.10.0homeobox protein BEL1 homolog
RefseqXP_019709353.10.0homeobox protein BEL1 homolog
TrEMBLA0A2H3Z1T20.0A0A2H3Z1T2_PHODC; homeobox protein BEL1 homolog
STRINGXP_008807227.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-113TALE family protein