PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933393.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 421aa    MW: 45405.8 Da    PI: 8.2693
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933393.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.96.6e-31217275259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_010933393.1 217 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 275
                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-31209277IPR003657WRKY domain
PROSITE profilePS5081133.109211277IPR003657WRKY domain
SuperFamilySSF1182902.62E-26214277IPR003657WRKY domain
SMARTSM007741.4E-37216276IPR003657WRKY domain
PfamPF031068.7E-26218275IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MCDFFWQRME NDQGDLADIV RAGGRGSALS SEFPNTSWQL PSEPITFPPP STEGKAVCDF  60
GDPFAGLRDP LLDQLIGSEF FDGPSTTSGL VSMISEGGGG GGDGGGSSGL GAQNMMTSAE  120
MRRPCNMFSR VLQISPGTGR TSPLSPRVIK PSPVVAGGMI KVADGSLGCP VDPSIRVQIS  180
SPRTPGIKRR KSLAKKVVCI PAPAATSSRS SGEVVPSDLW AWRKYGQKPI KGSPYPRGYY  240
RCSSSKGCSA RKQVERSRTD PNMLVITYTS EHNHPWPTQR NALAGSSRSQ SSKNSSSGSK  300
NSPHKRKPPT SHGEESKVMT SSSAPAVKGE AREMGKAIDS VENNEFDQLF QQSYKSMIPE  360
SNQPNDFFAD LAELEPDPMS LIFSKGSMET KPDEERGERA LDPFNFFDWT GNSFEEAKKG  420
L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-25191278280Disease resistance protein RRS1
5w3x_D3e-25191278280Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00171DAPTransfer from AT1G30650Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010933393.10.0probable WRKY transcription factor 14
TrEMBLA0A2H3XTU50.0A0A2H3XTU5_PHODC; probable WRKY transcription factor 14
STRINGXP_008788702.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-87WRKY DNA-binding protein 14