 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010933376.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 242aa MW: 27706.1 Da PI: 7.8767 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010933376.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.1 | 6.1e-18 | 109 | 163 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee+F+++ +++ +++ +Ak+l+L rqV vWFqNrRa+ k
XP_010933376.1 109 RKKLRLSKEQSCYLEECFKEHTTLNPKQKLAIAKRLNLLPRQVEVWFQNRRARTK 163
678899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 113.1 | 1.8e-36 | 109 | 196 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
+kk+rlskeq+ LEe+F+e+++L+p++K ++a++L+l prqv+vWFqnrRARtk+kq E+dy++L ++++ l+een++L+ke +eL+
XP_010933376.1 109 RKKLRLSKEQSCYLEECFKEHTTLNPKQKLAIAKRLNLLPRQVEVWFQNRRARTKLKQSEVDYKYLIQWCEYLTEENRMLRKEIQELK 196
69*************************************************************************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MDIDSSMRNG DWGGNQSLTS QEPKLMDKDG GQPTIHPSLQ LELKLPWSTE TESEAGDEAK 60
SRGGVKGPTG SDDPCDDTKP SPSASHRVIA ERGSQGRHND SEGDGGRGRK KLRLSKEQSC 120
YLEECFKEHT TLNPKQKLAI AKRLNLLPRQ VEVWFQNRRA RTKLKQSEVD YKYLIQWCEY 180
LTEENRMLRK EIQELKAFKS PLQNVHHYKQ QTMLTMCPSC QHAIFLQKID SFHDTADREN 240
HP
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 106 | 112 | RGRKKLR |
| 2 | 157 | 165 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| UniProt | Probable transcription factor. {ECO:0000250}. |
