PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010932321.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 437aa    MW: 48548.3 Da    PI: 5.1849
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010932321.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.4e-31216270155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k r+rWt+eLHe+Fv+av+ LGG+++AtPk+il  m+v+gLt++hvkSHLQkYRl
  XP_010932321.1 216 KSRMRWTQELHESFVQAVKDLGGADRATPKSILIEMGVQGLTIYHVKSHLQKYRL 270
                     68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-16215271IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.9E-29216272IPR009057Homeodomain-like
PROSITE profilePS5129410.882216273IPR017930Myb domain
TIGRFAMsTIGR015571.4E-24216271IPR006447Myb domain, plants
PfamPF002496.0E-10218269IPR001005SANT/Myb domain
PfamPF143795.0E-12307350IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MSYHASRNVG SSMFGTERTT SLPVFNTPIK WNGPNGLNEE NFPTTMSDFL EIESYQQPCN  60
PLLVTLIHQD GLNQCHSLPN LTSSSSTLTK STNICSQPSI CYTNPLASSS SVLEQYPHSG  120
NMVALPQLLL SKAQSSSIQT LAPTSLPGLG WTYQPNEDAQ IPGDMDDILP SAEQVEWQLE  180
SDQPNQIILG NGNPDRYEVT GVNQEAKVTG VNVGYKSRMR WTQELHESFV QAVKDLGGAD  240
RATPKSILIE MGVQGLTIYH VKSHLQKYRL QRYQPEGTED KRPSCLEGKR RNATEDSGAP  300
KMSSKESETL YTQWEHQKAL HEQLKILRKL QLQTEENGRC LQKFMEDQYK VREAFFHATQ  360
SMSMTKGIAT EGTSAPFSSD KLLVSLDEDL TKDDMLSDLA KNDVSSDVEL VASPSCKRAR  420
IDAESSKATI SSNNFQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-23216274260Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026663015.10.0myb family transcription factor PHL5-like
RefseqXP_026663239.10.0myb family transcription factor PHL5-like
TrEMBLA0A2H3YKJ30.0A0A2H3YKJ3_PHODC; myb family transcription factor PHL5-like
STRINGXP_008799117.10.0(Phoenix dactylifera)
STRINGXP_008799992.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5085722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.14e-38G2-like family protein