 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010931546.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
NF-YC |
| Protein Properties |
Length: 290aa MW: 31712.9 Da PI: 5.2983 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010931546.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 59.6 | 6.6e-19 | 6 | 86 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
++++P +rikki++adedv +i+ +Pvl+ska elf+ +l r++ + +t+ ++++v + ++fdfl div +
XP_010931546.1 6 ETRFPASRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYDITLRRGMKTMSALHLKQCVHSFNVFDFLKDIVSK 86
5789**************************************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MRKKLETRFP ASRIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCDRT YDITLRRGMK 60
TMSALHLKQC VHSFNVFDFL KDIVSKVPDM GTSDAGGDDR SAKRRKAADD DNDNEELKRS 120
KAHEGAAAHG GGGRGRGRGR GRGRGARGAR GADKDGAHYD KYEDDPGSSP QHSDRPPHMK 180
SEIVDDGISA RESKETTVSC SNAGAAIRNF DLNLDLDENG DTPTAAATAT DSIKATATAA 240
SSETNHEMKH DEYPGWSLSD MDKMAIDPIQ FALSNRRLDE EEEDYDNEDG
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 133 | 143 | RGRGRGRGRGR |
| 2 | 135 | 144 | RGRGRGRGRG |
