PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010931491.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 328aa MW: 36135.6 Da PI: 9.4726

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010931491.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49	1.3e-15	258	301	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe kv Le+eN++Lkk+ XP_010931491.1 258 RRQKRMIKNRESAARSRARKQAYTNELEYKVSRLEEENERLKKQ 301 79***************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.3E-13	254	326	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.507	256	301	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.25E-11	258	303	No hit	No description
Pfam	PF00170	2.3E-13	258	301	IPR004827	Basic-leucine zipper domain
CDD	cd14707	6.76E-24	258	306	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.0E-14	258	303	No hit	No description
PROSITE pattern	PS00036	0	261	276	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MASQGGGGSG GQRFQIESLA RQGFLYSLTL NEVQSHFGEP LTSMNLDELL KSVFPEGNQS 60 LGMDLDAATS QYTSSSGLQR QGSITMPQAL SKKTVDEVWR DIQQGQHKSI EEQRSGRERQ 120 VTLGEMTLED FLVKAGVVVE GSAKDANDMM RSVGPVGSAN PVGGPQDFGQ GAHWLQQYRQ 180 MSAMDQHQQG QQSMMGAYVP SRPVPQPLGL GASPILDAVF PDGQMSISSP GLGALSDPQT 240 PGRKRAASGD KTDKLVERRQ KRMIKNRESA ARSRARKQAY TNELEYKVSR LEEENERLKK 300 QKELDKILFS MPLPEPRYQL RRTSSASF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010931491.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-87	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A2H3Z300	0.0	A0A2H3Z300_PHODC; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_008807330.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	9e-90	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]