PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930934.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 292aa    MW: 31797 Da    PI: 9.0527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930934.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.78.6e-1388135455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h   Er RR+++++ f  L  llP++     +K +K++i+ +Av+YIk+L+
  XP_010930934.1  88 MHIWTERERRKKMRNMFTSLHALLPHL----PPKADKSTIVDEAVKYIKKLE 135
                     56678*********************6....39****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-1584150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.08784134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.6E-1687147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.22E-1287139No hitNo description
PfamPF000105.0E-1089135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-992140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2608.8E-4215260No hitNo description
CDDcd048731.73E-4217273No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MSEGGGGEGG QEKLLRQGQL WALFNSDNSG GDTVIKPPES SSNSLSGPAP GATVSAGGKR  60
ASDGASKSSS SKGGSQEGKG PSESDHEMHI WTERERRKKM RNMFTSLHAL LPHLPPKADK  120
STIVDEAVKY IKKLEQNVQK LEKQKEERIR GATSEEPSSK TQGMEMTTRE AFMADQVKNW  180
AAANSPTAVS IPRCRSSFQT WTSPNVVLNV TGSDAHISIC TAKKPGILSA IVYVLERHKL  240
EVVSAQISSN RFRSMIMIHA HATGVSDQFP EMLMIEDLYK YAVGEILLWL TP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930934.10.0transcription factor bHLH95
TrEMBLA0A3Q0HX961e-165A0A3Q0HX96_PHODC; transcription factor bHLH95
STRINGXP_008781647.11e-154(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20053691
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.11e-40bHLH family protein