PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_010930934.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 292aa MW: 31797 Da PI: 9.0527

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010930934.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.7	8.6e-13	88	135	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h Er RR+++++ f L llP++ +K +K++i+ +Av+YIk+L+ XP_010930934.1 88 MHIWTERERRKKMRNMFTSLHALLPHL----PPKADKSTIVDEAVKYIKKLE 135 56678*******************6....39**************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	1.57E-15	84	150	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.087	84	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.6E-16	87	147	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.22E-12	87	139	No hit	No description
Pfam	PF00010	5.0E-10	89	135	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.6E-9	92	140	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	8.8E-4	215	260	No hit	No description
CDD	cd04873	1.73E-4	217	273	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009793	Biological Process	embryo development ending in seed dormancy
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
MSEGGGGEGG QEKLLRQGQL WALFNSDNSG GDTVIKPPES SSNSLSGPAP GATVSAGGKR 60 ASDGASKSSS SKGGSQEGKG PSESDHEMHI WTERERRKKM RNMFTSLHAL LPHLPPKADK 120 STIVDEAVKY IKKLEQNVQK LEKQKEERIR GATSEEPSSK TQGMEMTTRE AFMADQVKNW 180 AAANSPTAVS IPRCRSSFQT WTSPNVVLNV TGSDAHISIC TAKKPGILSA IVYVLERHKL 240 EVVSAQISSN RFRSMIMIHA HATGVSDQFP EMLMIEDLYK YAVGEILLWL TP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010930934.1	0.0	transcription factor bHLH95
TrEMBL	A0A3Q0HX96	1e-165	A0A3Q0HX96_PHODC; transcription factor bHLH95
STRING	XP_008781647.1	1e-154	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2005	36	91

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-40	bHLH family protein