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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010930598.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 367aa MW: 41356.1 Da PI: 8.1069 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.9 | 4.3e-08 | 236 | 281 | 17 | 62 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 A+rsR RK+++i+eLe+ v++L+ae ++ ele l k+ l e XP_010930598.1 236 AQRSRVRKLQYIAELERNVQALQAEGMEVSAELEFLDKQNLILNLE 281 89**********************************9998766655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-4 | 225 | 284 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.52E-14 | 226 | 275 | No hit | No description |
SuperFamily | SSF57959 | 2.04E-5 | 236 | 278 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.9E-7 | 236 | 278 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence Send to blast |
MASTKGVANF RNSTSSGKQS FLPPKSPFPT MPVPYADYGT IGTKGIPKLR EGNRHHQRTS 60 SESFLIEEQP SWLDDLLNEP EMPVKRGAHR RSTSDSFAYL DGANIYANME TLVQEEGRQR 120 GISSQPSWGV QDFDRLKDVQ HSPYYTESNS FGKPQNRGWE ALNMVNCTSG GPLAKDKMVH 180 PGSTCVPMEA DAATSYVTEK EQERSPQDSK GTSERKEGSH VKQSDADPKR VKQQFAQRSR 240 VRKLQYIAEL ERNVQALQAE GMEVSAELEF LDKQNLILNL ENKTLKQRLD SLAQEHLIKC 300 LQQEMLEREI ARLRSSYQQQ QQQLQQPPAP AHSRSSSRDL ESQLANLSLK HKEPNSGRDP 360 VTGPLHI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019708541.1 | 0.0 | uncharacterized protein At4g06598 | ||||
TrEMBL | A0A3Q0HYE5 | 0.0 | A0A3Q0HYE5_PHODC; uncharacterized protein At4g06598-like isoform X3 | ||||
STRING | XP_008786509.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3310 | 36 | 66 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 7e-92 | bZIP family protein |