PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_010930598.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 367aa MW: 41356.1 Da PI: 8.1069

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010930598.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.9	4.3e-08	236	281	17	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 A+rsR RK+++i+eLe+ v++L+ae ++ ele l k+ l e XP_010930598.1 236 AQRSRVRKLQYIAELERNVQALQAEGMEVSAELEFLDKQNLILNLE 281 89**********************************9998766655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-4	225	284	IPR004827	Basic-leucine zipper domain
CDD	cd14703	1.52E-14	226	275	No hit	No description
SuperFamily	SSF57959	2.04E-5	236	278	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.9E-7	236	278	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence Send to blast
MASTKGVANF RNSTSSGKQS FLPPKSPFPT MPVPYADYGT IGTKGIPKLR EGNRHHQRTS 60 SESFLIEEQP SWLDDLLNEP EMPVKRGAHR RSTSDSFAYL DGANIYANME TLVQEEGRQR 120 GISSQPSWGV QDFDRLKDVQ HSPYYTESNS FGKPQNRGWE ALNMVNCTSG GPLAKDKMVH 180 PGSTCVPMEA DAATSYVTEK EQERSPQDSK GTSERKEGSH VKQSDADPKR VKQQFAQRSR 240 VRKLQYIAEL ERNVQALQAE GMEVSAELEF LDKQNLILNL ENKTLKQRLD SLAQEHLIKC 300 LQQEMLEREI ARLRSSYQQQ QQQLQQPPAP AHSRSSSRDL ESQLANLSLK HKEPNSGRDP 360 VTGPLHI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence Send to blast

MASTKGVANF RNSTSSGKQS FLPPKSPFPT MPVPYADYGT IGTKGIPKLR EGNRHHQRTS  60
SESFLIEEQP SWLDDLLNEP EMPVKRGAHR RSTSDSFAYL DGANIYANME TLVQEEGRQR  120
GISSQPSWGV QDFDRLKDVQ HSPYYTESNS FGKPQNRGWE ALNMVNCTSG GPLAKDKMVH  180
PGSTCVPMEA DAATSYVTEK EQERSPQDSK GTSERKEGSH VKQSDADPKR VKQQFAQRSR  240
VRKLQYIAEL ERNVQALQAE GMEVSAELEF LDKQNLILNL ENKTLKQRLD SLAQEHLIKC  300
LQQEMLEREI ARLRSSYQQQ QQQLQQPPAP AHSRSSSRDL ESQLANLSLK HKEPNSGRDP  360
VTGPLHI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019708541.1	0.0	uncharacterized protein At4g06598
TrEMBL	A0A3Q0HYE5	0.0	A0A3Q0HYE5_PHODC; uncharacterized protein At4g06598-like isoform X3
STRING	XP_008786509.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3310	36	66

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	7e-92	bZIP family protein