PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930490.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 174aa    MW: 19339.7 Da    PI: 4.7025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930490.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.3e-182069255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +k +g+Wv+eIr+p   gk++r++lg+f +ae+Aa a++ a+++l+g
  XP_010930490.1 20 NYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESAEMAAVAHDVAALSLKG 69
                    69****999.**********8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.38E-301979No hitNo description
SuperFamilySSF541711.11E-212079IPR016177DNA-binding domain
PROSITE profilePS5103223.3272077IPR001471AP2/ERF domain
PfamPF008471.9E-112069IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-312079IPR001471AP2/ERF domain
SMARTSM003805.7E-382083IPR001471AP2/ERF domain
PRINTSPR003675.6E-102132IPR001471AP2/ERF domain
PRINTSPR003675.6E-104359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MEMEHENKAA TEDTGAPATN YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ESAEMAAVAH  60
DVAALSLKGR DARLNFPESV DQLPRPASSD PSDIRSAALE AAARVRLRQE FARSSPVSSG  120
SPALEWLWND ELGLESPKMW AELAEAMLLA PPVWSNDTGE LEDWVQGSLW DPLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-171681167ATERF1
3gcc_A3e-171681167ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930490.11e-121ethylene-responsive transcription factor ERF038
SwissprotQ9C9I21e-35ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A2H3XNJ41e-101A0A2H3XNJ4_PHODC; ethylene-responsive transcription factor ERF038
STRINGXP_008786418.11e-102(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.18e-28ERF family protein