PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010930150.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 377aa    MW: 39530.1 Da    PI: 8.123
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010930150.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.9e-12310355655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + +++L +Av++IksLq
  XP_010930150.1 310 SIAERERRTRISEKLRKLQELVPNM----DKQTNTSDMLDLAVQHIKSLQ 355
                     689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.348304354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-15307366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.34E-12308359No hitNo description
Gene3DG3DSA:4.10.280.103.0E-14309369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-9310355IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-12310360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010119Biological Processregulation of stomatal movement
GO:0005829Cellular Componentcytosol
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MEQSPPNGRT GMGMFPAAER AAGPSAGLAR YVSAPGSLLA SIADTVVAGG VGGGEFQMGR  60
YFSSESPCLT SESTCKAGAG AGSPDLDPCR GKDGGGGIGG GVGPGMHRSY GVGKISVGAM  120
TPPVAAAPGE EGNSRGGGNP LIRHSSSPAG FLSHLMVDNV TRDTGSYSQP GTDGVYAMPS  180
RRFKSQLSFS RQGTLSQISE ISVPDVGESV GGSNNSNGTA GNVGQSYISS NFSIGSWDDT  240
NSIMFSAPPS KRAKDNNGDI INSLSAIESQ FSLPTTSLEM ATVEKFFQIQ QDQVPFKIRA  300
KRGCATHPRS IAERERRTRI SEKLRKLQEL VPNMDKQTNT SDMLDLAVQH IKSLQSQVQI  360
LTQERENCVC ASKQEKN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010930150.10.0transcription factor bHLH129 isoform X2
TrEMBLA0A2H3XH920.0A0A2H3XH92_PHODC; transcription factor bHLH129-like isoform X2
STRINGXP_008783787.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.14e-57bHLH family protein