PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010930149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bHLH | ||||||||
Protein Properties | Length: 380aa MW: 39831.4 Da PI: 8.123 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.5 | 9e-12 | 313 | 358 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + +++L +Av++IksLq XP_010930149.1 313 SIAERERRTRISEKLRKLQELVPNM----DKQTNTSDMLDLAVQHIKSLQ 358 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.348 | 307 | 357 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.62E-15 | 310 | 369 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.39E-12 | 311 | 362 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 3.0E-14 | 312 | 372 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.1E-12 | 313 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 4.4E-9 | 313 | 358 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010119 | Biological Process | regulation of stomatal movement | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MEQSPPNGRT GMGMFPAAER AAGPSAGLAR YVSAPGSLLA SIADTVVAGG VGGGEFQMGR 60 YFSSESPCLT SESTCKAGAG AGSPDLDPCR GKDGGGGIGG GVGPGMHRSY GVGKISVGAM 120 TPPVAAAPGE EGNSRGGGNP LIRHSSSPAG FLSHLMVDNG FPVTRDTGSY SQPGTDGVYA 180 MPSRRFKSQL SFSRQGTLSQ ISEISVPDVG ESVGGSNNSN GTAGNVGQSY ISSNFSIGSW 240 DDTNSIMFSA PPSKRAKDNN GDIINSLSAI ESQFSLPTTS LEMATVEKFF QIQQDQVPFK 300 IRAKRGCATH PRSIAERERR TRISEKLRKL QELVPNMDKQ TNTSDMLDLA VQHIKSLQSQ 360 VQILTQEREN CVCASKQEKN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010930149.1 | 0.0 | transcription factor bHLH129 isoform X1 | ||||
TrEMBL | A0A2H3XHG1 | 0.0 | A0A2H3XHG1_PHODC; transcription factor bHLH129-like isoform X1 | ||||
STRING | XP_008783787.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7071 | 37 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 4e-59 | bHLH family protein |