PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929791.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 312aa    MW: 34547.9 Da    PI: 4.6282
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929791.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-11127170755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ErrRR r+++++ eLr+l+P+      +K++Ka+i   Av Y+++Lq
  XP_010929791.1 127 ISERRRRGRMKDKLYELRSLVPNI-----TKMDKASIIADAVMYVQNLQ 170
                     78*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-16118184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.682120169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.8E-16122185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.17E-13122172No hitNo description
PfamPF000104.9E-9126170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12126175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MEEHQLFFTP QAVLMDTMPH DGLMNNTNFD TTTITSYEHV FDEFMLFGNG YDGNGLHSMV  60
ENLFDGEGEG TSSFGLHVDA VEDFPEAYLS VDGNASASPE EKQGDGNSSG GTTNVARSRR  120
DRSKTLISER RRRGRMKDKL YELRSLVPNI TKMDKASIIA DAVMYVQNLQ RQAKKLAEEI  180
TLLESSSKVD QVLQIPFEHT MNVSQVDQGR SSPSGGKVLR LIAHDVGEGR FFVKLECSKG  240
EGISSALYSA IESLGCFDLA SSNISIASEI YVLTLTLNVR GFVEEMNVST VKLWIMGAIL  300
KEGFEFEMTA MF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929791.20.0transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
TrEMBLA0A2H3XUU60.0A0A2H3XUU6_PHODC; transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
STRINGXP_008788896.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55463057
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-61FER-like regulator of iron uptake