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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010929454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bZIP | ||||||||
Protein Properties | Length: 123aa MW: 14168.7 Da PI: 7.0755 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.1 | 4e-13 | 34 | 83 | 7 | 56 |
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 rr+++NRe+ArrsR RK+ + eL v L a N++L +el++ +e XP_010929454.1 34 RRRRISNRESARRSRMRKQRHLGELWSQVVHLRATNRRLVDELNHVVEER 83 69*****************************************9988776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.5E-11 | 30 | 92 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.5E-11 | 33 | 82 | No hit | No description |
Pfam | PF00170 | 4.6E-10 | 34 | 89 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.28E-14 | 34 | 84 | No hit | No description |
PROSITE profile | PS50217 | 9.749 | 34 | 86 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.1E-10 | 34 | 83 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 35 | 50 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MGSGDGVHLP CSGPGNTLTS DEADEHQPGL VDERRRRISN RESARRSRMR KQRHLGELWS 60 QVVHLRATNR RLVDELNHVV EERDRILYEN AWLRQEASDL REKLNYMQVE STASSAPTAS 120 YET |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 44 | 51 | RRSRMRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010929454.1 | 4e-86 | basic leucine zipper 43-like | ||||
TrEMBL | A0A2H3YEF9 | 3e-47 | A0A2H3YEF9_PHODC; bZIP transcription factor RISBZ5-like | ||||
STRING | XP_008783104.1 | 4e-61 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-19 | basic leucine-zipper 42 |