PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929070.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 266aa    MW: 29351.8 Da    PI: 4.7127
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929070.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH581.6e-184695255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h++ E+rRR +iN++f+ Lr+l+P++    ++K +Ka+ L +++eYIk Lq
  XP_010929070.1 46 RSKHSATEQRRRYKINDRFQILRDLIPHS----DQKRDKASFLLEVIEYIKFLQ 95
                    899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.3E-2244102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.0724494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-1944114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.22E-184699No hitNo description
PfamPF000105.2E-164695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-1350100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MDTASQLSED EDEFGRRQGS SQKVELSVKV DGKGGGQKPG TPTTPRSKHS ATEQRRRYKI  60
NDRFQILRDL IPHSDQKRDK ASFLLEVIEY IKFLQERLQK YEPYQGWCPA NAKLMPWSNS  120
QGPTDGVSDS SHVFKNGPSP PGFMFTEKFV DNTIPIAPTM LSHTQNVEEP DMNPGTGAVL  180
VPLQPNFCAS VGMESGLTEP QEGLISDSDN MASQSQSWQR PSGPADCNIG GDMLSEQEEL  240
AIDEGTISIS SVYTQGIMKT PQLLIK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929070.10.0transcription factor BIM2 isoform X5
TrEMBLA0A2H3XFJ31e-171A0A2H3XFJ3_PHODC; transcription factor BIM2-like isoform X1
STRINGXP_008783041.11e-172(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-41BES1-interacting Myc-like protein 2