PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929068.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 332aa    MW: 36016.9 Da    PI: 4.6783
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929068.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-104689255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h++ E+rRR      f+ Lr+l+P++    ++K +Ka+ L +++eYIk Lq
  XP_010929068.1 46 RSKHSATEQRRR------FQILRDLIPHS----DQKRDKASFLLEVIEYIKFLQ 89
                    778899999988......888*******9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.1443888IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.41E-1344107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-144496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-74689IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.71E-124693No hitNo description
SMARTSM003533.6E-55094IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MDTASQLSED EDEFGRRQGS SQKVELSVKV DGKGGGQKPG TPTTPRSKHS ATEQRRRFQI  60
LRDLIPHSDQ KRDKASFLLE VIEYIKFLQE RLQKYEPYQG WCPANAKLMP WSNSQGPTDG  120
VSDSSHVFKN GPSPPGFMFT EKFVDNTIPI APTMLSHTQN VEEPDMNPGT GAVLVPLQPN  180
FCASVGMESG LTEPQEGLIS DSDNMASQSQ SWQRPSGPAD CNIGGDMLSE QEELAIDEGT  240
ISISSVYTQG ILTTLTQALE SSGIDLSQAS ISVQINLGKR AISRRPTATT TMSGAKDHED  300
PSAVNQVMGD SRVGSSGEES EQALKRHKVD SS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029122083.10.0transcription factor BIM2 isoform X2
TrEMBLA0A2H3XFJ30.0A0A2H3XFJ3_PHODC; transcription factor BIM2-like isoform X1
STRINGXP_008783041.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-52BES1-interacting Myc-like protein 2