PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_010928615.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Trihelix

Protein Properties

Length: 313aa MW: 34758.9 Da PI: 9.1666

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010928615.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	51.9	2.1e-16	34	121	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergfe..rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ vl+L+e++++++ +r+klk+ +We++++++ r g++ +sp qCk+k+e+++kry+++ + + ++s s+++++ +++ XP_010928615.1 34 EWSESGVLCLLEVYESKWLLRNRAKLKGSDWEDIARQVsaRCSGMKglKSPSQCKNKIESMKKRYRAESSAAHE--PNSCSSWQFYARMD 121 5**********************************988666664338*************99888887..788889****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	5.3E-20	32	123	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence Send to blast
MDSAQGGSNH LPAGPDHSLV PAATRVPDKG KRDEWSESGV LCLLEVYESK WLLRNRAKLK 60 GSDWEDIARQ VSARCSGMKG LKSPSQCKNK IESMKKRYRA ESSAAHEPNS CSSWQFYARM 120 DSLLKGTPNC AAQPKSNHNI NLQALPKMEN EVEVVGHLQD SNQDDASNTS PVDVKAVNND 180 NSDKKESRGD SDGSAPRSKA VNAEERTGRV GNPSKRRKES GNEMADSIRL LAESILKIEQ 240 AKIEMYKDSE RMRAEAEIKR GEMELKRTEI IAKTQLQIAK LFAKKSQGRS SKSEGSSLRT 300 ELDMLPRRDV TDD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010928615.1	0.0	trihelix transcription factor ASIL1
TrEMBL	A0A2H3XWH4	0.0	A0A2H3XWH4_PHODC; trihelix transcription factor ASIL1-like
STRING	XP_008789713.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7333	33	46

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54390.1	2e-65	sequence-specific DNA binding transcription factors