PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928175.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 742aa    MW: 79864.9 Da    PI: 6.2974
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928175.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84.1e-32322379260
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     +DgynWrKYGqK+vkgse+prsYY+Ct+ +C++kkkvers+ d++++ei+Y+g Hnh+k
  XP_010928175.1 322 EDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCQMKKKVERSH-DGHITEIIYKGAHNHPK 379
                     8****************************************.***************85 PP
2WRKY103.11.5e-32537595159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+++prsYY+Ct +gC+v+k+ver+++d k v++tYeg+Hnh+
  XP_010928175.1 537 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHD 595
                     59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.525316380IPR003657WRKY domain
SuperFamilySSF1182901.06E-25318380IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-28318380IPR003657WRKY domain
SMARTSM007749.7E-36321379IPR003657WRKY domain
PfamPF031061.9E-24322378IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.9E-37522597IPR003657WRKY domain
SuperFamilySSF1182901.44E-28529597IPR003657WRKY domain
PROSITE profilePS5081138.124532597IPR003657WRKY domain
SMARTSM007747.5E-38537596IPR003657WRKY domain
PfamPF031068.2E-25538595IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009942Biological Processlongitudinal axis specification
GO:0030010Biological Processestablishment of cell polarity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MAGADDNATM IGDWTSLPSP IPRTFLSTFL NEEFGSRSLS DLLAENGNEG PPPGSEKQKT  60
STDPKEEKVQ AGVQYLSDRS IEPSLFGAHK SSLQGGLAER MAARAGFNVP KLNMARITSA  120
NVGSSSSDVR SPYLTIPPGL SPTTLLESPV FLSNSMAQPS PTTGKFPIAQ HENSNTVTTS  180
VSAFPNKSED YSLKDVRETF SFKPHMDSSS SYFSTAEKKG ASTVDQQQSL PSIEVSVQSG  240
KHMQPPSLET GIVSLQNQQQ FNHQAGFSDS SDRKDATDDV TFDQRTSDSF MGNEHSPPPN  300
DQQDGEAAPK ELSSMAPGAP AEDGYNWRKY GQKQVKGSEY PRSYYKCTHL NCQMKKKVER  360
SHDGHITEII YKGAHNHPKP PPNRRSGIPS SHPFNDPQID ASEQPGSQAS FDGKPLWATS  420
TQNGTGGQEW RGDGQEASSS ATVAAEHCDP STSIQTQDGP RLESQDAIDV SSTLSNDEEE  480
EDRATHGSVS LGGDGEGDET ESKRRKLDAC ALEMGAASRA VREPRVVVQT TSEVDILDDG  540
YRWRKYGQKV VKGNPNPRSY YKCTNPGCTV RKHVERASHD LKSVITTYEG KHNHDVPAAR  600
NSSHPNSAPS GTAGNSASQS HSLHRGLEPT QDGLVRFDAP TSLGTFCLPG REQLGPAAAF  660
SFGMGQQGLA NLAMAGLGPV ASMKMPVLHP VHPFLGHHQA AGAGFHILKG EPKEEPVTES  720
RLPIPNGGPV YHQMMGRLPL GP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-37322598878Probable WRKY transcription factor 4
2lex_A1e-37322598878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00071PBMTransfer from AT5G56270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928175.10.0probable WRKY transcription factor 2
RefseqXP_010928176.10.0probable WRKY transcription factor 2
RefseqXP_010928177.10.0probable WRKY transcription factor 2
RefseqXP_010928179.10.0probable WRKY transcription factor 2
TrEMBLA0A2H3YC150.0A0A2H3YC15_PHODC; probable WRKY transcription factor 2 isoform X1
STRINGXP_008796561.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.10.0WRKY DNA-binding protein 2