PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010927404.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 361aa    MW: 38841.7 Da    PI: 6.2454
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010927404.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20175224255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +grW+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_010927404.1 175 RYRGVRQRP-WGRWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 224
                     7********.**********7.....337************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.09E-22175233IPR016177DNA-binding domain
PROSITE profilePS5103225.804175232IPR001471AP2/ERF domain
SMARTSM003802.5E-36175238IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-32175233IPR001471AP2/ERF domain
PfamPF008471.6E-14175224IPR001471AP2/ERF domain
PRINTSPR003671.8E-11176187IPR001471AP2/ERF domain
CDDcd000181.40E-15183234No hitNo description
PRINTSPR003671.8E-11198214IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MCFEPANASG GRSAHVQTDE VEEDGAVARM SSTMAQAMML SGYGQAGQET STTVSALTHI  60
FPGERVPGGL AGELVPPGCW GSVGSPSSSH PWGGQGGGGG GQKRTREELP PELGMRYDHH  120
GYGQFDRYHG ETSPNVIATE HSQQSPLTSI QAPAMEEFSP SSYPAGAREA APRRRYRGVR  180
QRPWGRWAAE IRDPHKAARV WLGTFDTAEA AARAYDEAAL RFRGSRAKLN FPEDARLPSM  240
PPSSPPANSN ATLSSDASRD YLEYSRLLQG DGKYQRLPPT SLLDRFMYPN HPWAVPSTTI  300
DASLASRSLQ TSSSVFASAS PYPQLYTSEA TASENLVREG GSAFQTPYST DSSQLPPPTS  360
E
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-22176232663ATERF1
3gcc_A4e-22176232663ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010927404.10.0AP2-like ethylene-responsive transcription factor PLT2
TrEMBLA0A2H3Y5Z41e-141A0A2H3Y5Z4_PHODC; ethylene-responsive transcription factor ERF115-like isoform X1
STRINGXP_008793923.11e-142(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2495935
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.12e-11ethylene response factor 110