PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010927394.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 280aa MW: 30251 Da PI: 9.4359

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010927394.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.1	6.1e-16	198	251	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +l+r++r++kNRe+A rsR+RK+a++ eLe v +Le+eN +L k ee ke XP_010927394.1 198 ALQRQKRMIKNRESAARSRERKQAYTVELESLVTQLEEENAQLLKYQEEQHKER 251 79***************************************9988665544443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.3E-14	191	258	No hit	No description
SMART	SM00338	4.1E-10	196	260	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.2E-14	197	257	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.496	198	250	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.06E-11	200	251	No hit	No description
CDD	cd14707	6.44E-22	200	254	No hit	No description
PROSITE pattern	PS00036	0	203	218	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence Send to blast
MASSRVIASS SSANSEFLRQ SSLISPAIAD IQSSAGVYPI GTLGSVSMED LLRNIYPENA 60 GPFAREDGAT GGEARASASR QGNFPLPKEI ASRTVDEVWN EIAAGRKGDG GNGSSGEMTL 120 EDFLARAGTV REGEVRVPSG SGQGGFGLDS VSGGGFGQQQ LLPLENPVLG IGNGVEGGGG 180 GRRRVRKRPM LDPVDRAALQ RQKRMIKNRE SAARSRERKQ AYTVELESLV TQLEEENAQL 240 LKYQEEQHKE RLQQLLENVI PVTEKKKPKL SLRRTCSMLW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010927394.1	0.0	bZIP transcription factor 12 isoform X1
TrEMBL	A0A2H3Y602	1e-138	A0A2H3Y602_PHODC; bZIP transcription factor 12-like isoform X1
STRING	XP_008793932.1	1e-139	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2665	37	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03970.1	6e-29	G-box binding factor 4