PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010927385.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 441aa    MW: 51208.6 Da    PI: 6.5606
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010927385.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix674e-21124215181
        trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpy 81 
                     +Wt+ +v++Li++ ++++e+  +            +kk++W+ vsk+m+er + +sp+qC++k+++lnkryk++ e+ +++t ++++++ ++
  XP_010927385.1 124 KWTDAMVKLLITVISYLNEDTVELDgsakkklavlQKKGKWKLVSKVMAERNCCVSPQQCEDKFNDLNKRYKRLIEILGRGTaCKVVENPAL 215
                     7**************99999887323356678888*********************************************953777776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-19122246No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MEGNMSAGNM MAGPSSYGSF DLQVSMAMHQ QQHPHGCFHH QQQQPTQTQH QGSVVHQPMN  60
IIFPQSVGQM NEREQQPTLQ MMTDYRKVDH GKISTSEEDD TEDGADGHNE DERGKKAAPW  120
HRVKWTDAMV KLLITVISYL NEDTVELDGS AKKKLAVLQK KGKWKLVSKV MAERNCCVSP  180
QQCEDKFNDL NKRYKRLIEI LGRGTACKVV ENPALLDYRH DLSGKVKDDV RKILSSKHLH  240
YEEMCSYHNK NRLHLPADPE VQRSVQLLLK TSDDNDARKA ARDDFDEDDH DEDSDDREDD  300
LEDNDTLLRD IGASCFSKRM KPGLVCEDVS FRNSWGSQNN PRRPHSQSIS FDVNQVFPEG  360
PTTPWVQKQL IRSRSIQLEE QKLQIQAEML EIEKQQFKWK CFRKKKDREL DKMRIQNERM  420
KLENERLALE LKRRELELDL N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010927385.20.0uncharacterized protein LOC105049444
TrEMBLA0A2H3ZRE90.0A0A2H3ZRE9_PHODC; uncharacterized protein LOC103710100 isoform X1
STRINGXP_008793938.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29203886
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.12e-95sequence-specific DNA binding transcription factors