PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010927251.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 246aa    MW: 27927.6 Da    PI: 4.8082
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010927251.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-145396755
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                     +Er+RR+++N+++  Lr+++P+      +K++Ka+i++ A++YI++Lq
  XP_010927251.1 53 VMERNRRRKLNERLYALRSVVPNI-----TKMDKASIVKDAIDYIQELQ 96
                    69*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.8184695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-1847112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.57E-1449100No hitNo description
SMARTSM003533.9E-1752101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-1753111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-125396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.29E-7166234No hitNo description
Gene3DG3DSA:3.30.70.2606.1E-4167234No hitNo description
PROSITE profilePS516719.553169246IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDDMEGYNSY WETKRFLESE ELDSWGLDEA ISTYYDSSSP DNAASSTATK NLVMERNRRR  60
KLNERLYALR SVVPNITKMD KASIVKDAID YIQELQEQER RILAEISELE SGKEEKLPIG  120
DTKREDVCFT QRKKIRTSPA SPLATGSPSL RSIQVIELRV CEVGDRTLVV SISCNKKRDT  180
MIKVCEILES LNLNIITASI TSVSRSLLHT LFVETDDMDR AQLKEKIETA IAELDGFRSP  240
VSSISY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010927251.11e-179transcription factor bHLH35
SwissprotQ2HIV94e-76BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A2H3ZCF01e-137A0A2H3ZCF0_PHODC; transcription factor bHLH35 isoform X1
STRINGXP_008811438.11e-138(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.16e-69bHLH family protein