PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010926543.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 241aa MW: 26736 Da PI: 6.6953

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010926543.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.2	1.9e-05	29	77	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + ++erE+ Rd++N+ f eL +l +a + + Ka+iL A + +++L XP_010926543.1 29 KIHKSEREKLKRDQLNELFLELGHVLEPA----RQNNGKATILGDASRILRDL 77 66789*********************998....67888999999998877766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	3.3E-7	25	95	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.05E-10	25	91	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.32E-4	25	82	No hit	No description
PROSITE profile	PS50888	11.204	27	77	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MANEANVAAE KPVDRSLSNK KNQRRVPKKI HKSEREKLKR DQLNELFLEL GHVLEPARQN 60 NGKATILGDA SRILRDLLAH VESLRKQNAA LLTESSYVTA ERDEIRDENT ALQAEITDLQ 120 NELQARIQSG SMWANSMDMG PPTLPQPLST MPPMLQQPPV IRPVYSAPIQ ELQLFPESRT 180 APAPPTPNSN VSRPHARYPT PSDSWPGQLL SSLPRTVQEG HLSSTSSINT TSSREEGSDE 240 A

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010926543.1	1e-175	transcription factor BHLH062
TrEMBL	A0A2H3XA01	1e-145	A0A2H3XA01_PHODC; transcription factor BHLH062-like
STRING	XP_008780656.1	1e-146	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2481	38	84

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47640.3	6e-41	bHLH family protein