PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926531.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 233aa    MW: 25475.1 Da    PI: 9.1786
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926531.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.5e-09147187954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_010926531.1 147 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYMKFL 187
                     699*****************87.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.707138187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-13139197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.28E-14142198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-14144193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-6148187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.72E-6161192No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MDVDFTNSPP EAQVDLMTMM FEMEKLADFS KPPPQPSAEF GSGPPPGPAF YNAPNINNTS  60
PPSSLLVGVP SSIPFSDPTM ITSNTLAAGT SSSEYSSQSS KWASVEAMRE MIFRIAAMQP  120
IHIDPESVKP PKRRNVRISK DPQSVAARHR RERISERIRI LQRLVPGGTK MDTASMLDEA  180
IRYMKFLKAQ VQSLERAAAT NPSTLGVATT TSPPVVGFST TGNHLCFDKR FIC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926531.11e-172transcription factor HEC2-like
TrEMBLA0A2H3XE242e-95A0A2H3XE24_PHODC; transcription factor HEC2-like
STRINGXP_008782342.13e-96(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31033682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-41bHLH family protein