 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010926425.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
NF-YC |
| Protein Properties |
Length: 252aa MW: 28021.5 Da PI: 5.759 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010926425.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 60.9 | 2.7e-19 | 7 | 86 | 19 | 98 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
+++P +rikki++adedv +i+ +P l+ska elf+ +l r++ + + +tl+ ++++v++ fdfl+d+v +
XP_010926425.1 7 TRFPASRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYEVTLQRGAKTLNSLHLKQCVKSYSAFDFLTDVVNK 86
579**************************************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MRKKLGTRFP ASRIKKIMQA DEDVGKIALA VPLLVSKALE LFLQDLCDRT YEVTLQRGAK 60
TLNSLHLKQC VKSYSAFDFL TDVVNKVPNL GSTEPCGDEK GISRRRKTLA HDGDLETNKE 120
LRSPKMAMRS ANISPRGRGR GRGRGRGRPR TRDIGCVKFE DDNDMFPEHG DLSRETEGEE 180
KGLEGKENMV QSVHPSCSSA SVEGATSTAE AKHDEFSAWP LPDVVGNIDV EPSKLVQLTM 240
QIDEDEDYDN ED
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 102 | 107 | SRRRKT |
| 2 | 137 | 146 | RGRGRGRGRG |
| 3 | 141 | 151 | RGRGRGRPRTR |
