PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926423.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 295aa    MW: 31911.4 Da    PI: 9.5908
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926423.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57344.64.1e-14109174468
          DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkk 68 
                     qr   ++  ++lL++ idf+++tg+ p + +++afy+ +k s+    +k+q+ +K+r+L++Kf+k 
  XP_010926423.1 109 QRRLADDNAVALLRAAIDFRSRTGSIPLAsHMSAFYDSAKASLLTPLTKDQVYNKLRHLRQKFQKA 174
                     677889999****************88877*********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.4E-12110195IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MPSKSKSSKR HPSSDPPEPK SHPNPTSSNP ILDPAAPTPS KNPNPRSSKP TKPSSSTPAL  60
PQSPSKPSDT MMPDDSSAAS PSRKSDRKRK ARDLSDDELP AAKSPQPGQR RLADDNAVAL  120
LRAAIDFRSR TGSIPLASHM SAFYDSAKAS LLTPLTKDQV YNKLRHLRQK FQKAGPPGSG  180
PNDGLVHELC AELWGGEDNK DVSKDRKKAN KGTLVVAVEN GVAADEEEEE PEEEVDGEER  240
GGGGPDSLPY VSSAAAEHWK ANGLCGVSWE VGLKRMDSSK ARSLEEKWRR RWATR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926423.30.0smoothelin-like
TrEMBLA0A2H3XDK31e-145A0A2H3XDK3_PHODC; uncharacterized protein LOC103701824
STRINGXP_008782236.11e-146(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00250.13e-10DNA-binding storekeeper protein-related transcriptional regulator