PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010925590.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

BES1

Protein Properties

Length: 337aa MW: 35988.2 Da PI: 8.6154

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010925590.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	202	1.9e-62	2	149	1	147
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspess 93 ++++r ptwkErEnnkrRERrRRaiaakiy+GLR+ Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e ++++g+s+s s +ss XP_010925590.1 2 TSGTRIPTWKERENNKRRERRRRAIAAKIYSGLRMCGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPpaECMDVVGCSTSPSLCSS 96 5899*********************************************************************99999*********** PP DUF822 94 lqsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvs 147 +q +sp++sy++sp+ ssf sp+s++ i++a++ +sl+p l++ls++ XP_010925590.1 97 YQ--------PSPCASYNPSPALSSFASPASSSYITNAHNadhfvdgNSLIPRLKNLSSAC 149 ........899999999999999999999888888766777777788888888887644 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	9.4E-67	3	146	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MTSGTRIPTW KERENNKRRE RRRRAIAAKI YSGLRMCGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKGCKPPPAE CMDVVGCSTS PSLCSSYQPS PCASYNPSPA LSSFASPASS 120 SYITNAHNAD HFVDGNSLIP RLKNLSSACS ASTKFPQHHL YMHGGSISAP VTPPLSSPTA 180 RTPRIKTNWY DPAAQPSWAS ANHTFLLNST PPSPGRQAWL AGIQLPTGGP SSPTFRLVSS 240 NPFGFFKEAM AGGGSSRVVR PGQSGTCSPV MPGGPGHIDV PMPDGTSDEF AFGSGSNSNH 300 PPAGLVKAWE GERIHEECGS DELDLTLGSS WARADAR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-24	6	81	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-24	6	81	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-24	6	81	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-24	6	81	372	447	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029121307.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	1e-133	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3ZQB9	1e-157	A0A2H3ZQB9_PHODC; protein BZR1 homolog 3-like
STRING	XP_008790049.1	1e-158	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-100	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]